Difference between revisions of "TransportSeed WATER"

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(Created page with "Category:Gene == Gene Tiso_gene_9922 == * left end position: ** 4457 * transcription direction: ** NEGATIVE * right end position: ** 6446 * centisome position: ** 49.67123...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Gene]]
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[[Category:Pathway]]
== Gene Tiso_gene_9922 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY] ==
* left end position:
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* taxonomic range:
** 4457
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
* transcription direction:
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* common name:
** NEGATIVE
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** formaldehyde oxidation I
* right end position:
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** 6446
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* centisome position:
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** 49.671234   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction(s) found ==
* [[3PGAREARR-RXN]]
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'''3''' reactions found over '''6''' reactions in the full pathway
** in-silico_annotation
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* [[6PGLUCONOLACT-RXN]]
***ec-number
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** 5 associated gene(s):
* [[RXN-15509]]
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*** [[Tiso_gene_10799]]
** in-silico_annotation
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*** [[Tiso_gene_20412]]
***ec-number
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*** [[Tiso_gene_5901]]
* [[RXN-15510]]
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*** [[Tiso_gene_15950]]
** in-silico_annotation
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*** [[Tiso_gene_8585]]
***ec-number
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** 6 reconstruction source(s) associated:
* [[RXN-15511]]
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*** [[annotation-experimental_annotation]]
** in-silico_annotation
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*** [[orthology-esiliculosus]]
***ec-number
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*** [[annotation-in-silico_annotation]]
* [[RXN-15512]]
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*** [[orthology-athaliana]]
** in-silico_annotation
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*** [[manual-primary_network]]
***ec-number
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*** [[orthology-creinhardtii]]
* [[RXN-15513]]
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* [[GLU6PDEHYDROG-RXN]]
** in-silico_annotation
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** 2 associated gene(s):
***ec-number
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*** [[Tiso_gene_16918]]
== Pathways associated ==
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*** [[Tiso_gene_14877]]
* [[PWY-1042]]
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** 4 reconstruction source(s) associated:
* [[P341-PWY]]
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*** [[manual-primary_network]]
* [[PWY-2221]]
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*** [[annotation-in-silico_annotation]]
* [[PWY-1622]]
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*** [[orthology-synechocystis]]
* [[GLUCONEO-PWY]]
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*** [[orthology-esiliculosus]]
* [[GLYCOLYSIS]]
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* [[PGLUCISOM-RXN]]
* [[PWY-6901]]
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** 1 associated gene(s):
* [[ANAGLYCOLYSIS-PWY]]
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*** [[Tiso_gene_19480]]
* [[PWY-7218]]
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** 3 reconstruction source(s) associated:
* [[PWY-6405]]
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*** [[annotation-experimental_annotation]]
* [[P124-PWY]]
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*** [[annotation-in-silico_annotation]]
* [[PWY-6886]]
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*** [[orthology-esiliculosus]]
* [[PWY66-399]]
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== Reaction(s) not found ==
* [[PWY-5723]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R10-RXN R10-RXN]
* [[PWY-6142]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R12-RXN R12-RXN]
* [[PWY-5484]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-3341 RXN-3341]
* [[PWY-7124]]
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* [[P122-PWY]]
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* [[PWY-7003]]
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== External links  ==
 
== External links  ==
{{#set: left end position=4457}}
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{{#set: taxonomic range=TAX-2}}
{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=formaldehyde oxidation I}}
{{#set: right end position=6446}}
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{{#set: reaction found=3}}
{{#set: centisome position=49.671234    }}
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{{#set: total reaction=6}}
{{#set: reaction associated=3PGAREARR-RXN|RXN-15509|RXN-15510|RXN-15511|RXN-15512|RXN-15513}}
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{{#set: completion rate=50.0}}
{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|PWY-1622|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|ANAGLYCOLYSIS-PWY|PWY-7218|PWY-6405|P124-PWY|PWY-6886|PWY66-399|PWY-5723|PWY-6142|PWY-5484|PWY-7124|P122-PWY|PWY-7003}}
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Revision as of 16:20, 21 March 2018

Pathway RUMP-PWY

  • taxonomic range:
  • common name:
    • formaldehyde oxidation I
  • Synonym(s):

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links