Difference between revisions of "CENTBENZCOA-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPDEHYRHAMREDUCT-RXN DTDPDEHYRHAMREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** m...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P163-PWY P163-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPDEHYRHAMREDUCT-RXN DTDPDEHYRHAMREDUCT-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P163-PWY P163-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** methionine_adenosyltransferase_regulatory_beta_subunit-related
+
** L-lysine fermentation to acetate and butanoate
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.1.1.133 EC-1.1.1.133]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** 3-keto-5-aminohexanoate pathway
 +
** L-lysine fermentation to acetate and butyrate
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''1''' reactions found over '''10''' reactions in the full pathway
−
** 1 [[PROTON]][c] '''+''' 1 [[DTDP-DEOH-DEOXY-MANNOSE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[DTDP-RHAMNOSE]][c]
+
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
−
* With common name(s):
+
** 3 associated gene(s):
−
** 1 H+[c] '''+''' 1 dTDP-4-dehydro-β-L-rhamnose[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 dTDP-β-L-rhamnose[c]
+
*** [[Tiso_gene_16181]]
−
 
+
*** [[Tiso_gene_15327]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_17451]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 4 reconstruction source(s) associated:
−
* [[Tiso_gene_4472]]
+
*** [[orthology-athaliana]]
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-creinhardtii]]
−
***EC-NUMBER
+
*** [[orthology-synechocystis]]
−
== Pathways  ==
+
*** [[orthology-esiliculosus]]
−
* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DTDPRHAMSYN-PWY DTDPRHAMSYN-PWY]
+
== Reaction(s) not found ==
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.4.1.11-RXN 1.4.1.11-RXN]
−
== Reconstruction information  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=2.8.3.9-RXN 2.8.3.9-RXN]
−
* Category: [[annotation]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.14-RXN 4.3.1.14-RXN]
−
** Source: [[annotation-in-silico_annotation]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
−
*** Tool: [[pathwaytools]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=BETA-LYSINE-56-AMINOMUTASE-RXN BETA-LYSINE-56-AMINOMUTASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-23-AMINOMUTASE-RXN LYSINE-23-AMINOMUTASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSACETYLTRANS-RXN PHOSACETYLTRANS-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R125-RXN R125-RXN]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21796 21796]
+
{{#set: common name=L-lysine fermentation to acetate and butanoate}}
−
* LIGAND-RXN:
+
{{#set: common name=3-keto-5-aminohexanoate pathway|L-lysine fermentation to acetate and butyrate}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02777 R02777]
+
{{#set: reaction found=1}}
−
* UNIPROT:
+
{{#set: total reaction=10}}
−
** [http://www.uniprot.org/uniprot/Q9JV74 Q9JV74]
+
{{#set: completion rate=10.0}}
−
** [http://www.uniprot.org/uniprot/P37760 P37760]
+
−
** [http://www.uniprot.org/uniprot/Q46769 Q46769]
+
−
** [http://www.uniprot.org/uniprot/O33664 O33664]
+
−
** [http://www.uniprot.org/uniprot/O66251 O66251]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=methionine_adenosyltransferase_regulatory_beta_subunit-related}}
+
−
{{#set: ec number=EC-1.1.1.133}}
+
−
{{#set: gene associated=Tiso_gene_4472}}
+
−
{{#set: in pathway=DTDPRHAMSYN-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 15:20, 21 March 2018

Pathway P163-PWY

  • taxonomic range:
  • common name:
    • L-lysine fermentation to acetate and butanoate
  • Synonym(s):
    • 3-keto-5-aminohexanoate pathway
    • L-lysine fermentation to acetate and butyrate

Reaction(s) found

1 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CENTBENZCOA-PWY&oldid=33646"