Difference between revisions of "PWY-6361"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAG...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIAL AIAL] == * direction: ** REVERSIBLE * common name: ** 1-(5'-Phosphoribosyl)-5-amino-4-(N-succi...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIAL AIAL] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** REVERSIBLE
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* common name:
 
* common name:
** heme biosynthesis I (aerobic)
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** 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole AMP-lyase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''4''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
* [[PROTOHEMEFERROCHELAT-RXN]]
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** 1.0 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''<=>''' 1.0 [[AICAR]][c] '''+''' 1.0 [[FUM]][c]
** 2 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_3284]]
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** 1.0 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole[c] '''<=>''' 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] '''+''' 1.0 fumarate[c]
*** [[Tiso_gene_15900]]
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** 6 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_6720]]
*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
*** [[orthology-athaliana]]
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== Pathways  ==
*** [[orthology-synechocystis]]
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== Reconstruction information  ==
*** [[orthology-creinhardtii]]
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* Category: [[orthology]]
* [[PROTOPORGENOXI-RXN]]
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** Source: [[orthology-creinhardtii]]
** 2 associated gene(s):
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*** Tool: [[pantograph]]
*** [[Tiso_gene_11986]]
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*** [[Tiso_gene_15401]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[RXN0-1461]]
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** 5 associated gene(s):
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*** [[Tiso_gene_2247]]
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*** [[Tiso_gene_2246]]
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*** [[Tiso_gene_13364]]
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*** [[Tiso_gene_13365]]
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*** [[Tiso_gene_3671]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[UROGENDECARBOX-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_18743]]
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*** [[Tiso_gene_19684]]
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*** [[Tiso_gene_18744]]
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*** [[Tiso_gene_5173]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
* ECOCYC:
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{{#set: direction=REVERSIBLE}}
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
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{{#set: common name=1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole AMP-lyase}}
* SGD-PATHWAY : HEME-BIOSYNTHESIS-II
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{{#set: gene associated=Tiso_gene_6720}}
* PLASMOCYC : HEME-BIOSYNTHESIS-II
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{{#set: in pathway=}}
* HUMANCYC : HEME-BIOSYNTHESIS-II
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{{#set: reconstruction category=orthology}}
{{#set: taxonomic range=TAX-2}}
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{{#set: reconstruction source=orthology-creinhardtii}}
{{#set: taxonomic range=TAX-2759}}
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{{#set: reconstruction tool=pantograph}}
{{#set: common name=heme biosynthesis I (aerobic)}}
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{{#set: reaction found=4}}
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{{#set: total reaction=4}}
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{{#set: completion rate=100.0}}
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Revision as of 16:21, 21 March 2018

Reaction AIAL

  • direction:
    • REVERSIBLE
  • common name:
    • 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole AMP-lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole[c] <=> 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] + 1.0 fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links