Difference between revisions of "PWY-7206"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5078 PWY-5078] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16997 RXN-16997] == * direction: ** LEFT-TO-RIGHT * common name: ** cytoplasmic ** pgm_pmm * Sy...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5078 PWY-5078] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16997 RXN-16997] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** L-isoleucine degradation II
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** cytoplasmic
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** pgm_pmm
 
* Synonym(s):
 
* Synonym(s):
** Ehrlich pathway
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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** 1 [[GLC-1-P]][c] '''+''' 1 [[Phosphorylated-phosphoglucomutase]][c] '''=>''' 1 [[ALPHA-GLUCOSE-16-BISPHOSPHATE]][c] '''+''' 1 [[Phosphoglucomutase]][c]
** 3 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_14984]]
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** 1 α-D-glucopyranose 1-phosphate[c] '''+''' 1 a phosphorylated phosphoglucomutase[c] '''=>''' 1 α-glucose 1,6-bisphosphate[c] '''+''' 1 a phosphoglucomutase[c]
*** [[Tiso_gene_18403]]
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*** [[Tiso_gene_17748]]
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== Genes associated with this reaction  ==
** 7 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
*** [[annotation-experimental_annotation]]
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* Gene: [[Tiso_gene_4816]]
*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
*** [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
*** [[orthology-athaliana]]
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** Source: [[annotation-experimental_annotation]]
*** [[orthology-synechocystis]]
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*** Assignment: EC-NUMBER
*** [[manual-primary_network]]
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* Gene: [[Tiso_gene_13477]]
*** [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
* [[RXN-7694]]
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*** Assignment: EC-NUMBER
** 5 associated gene(s):
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** Source: [[annotation-experimental_annotation]]
*** [[Tiso_gene_6562]]
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*** Assignment: EC-NUMBER
*** [[Tiso_gene_5424]]
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== Pathways  ==
*** [[Tiso_gene_6563]]
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== Reconstruction information  ==
*** [[Tiso_gene_5425]]
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* Category: [[annotation]]
*** [[Tiso_gene_7649]]
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** Source: [[annotation-experimental_annotation]]
** 1 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
== Reaction(s) not found ==
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*** Tool: [[pathwaytools]]
* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.72-RXN 4.1.1.72-RXN]
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-4751}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=L-isoleucine degradation II}}
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{{#set: common name=cytoplasmic}}
{{#set: common name=Ehrlich pathway}}
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{{#set: common name=pgm_pmm}}
{{#set: reaction found=2}}
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{{#set: gene associated=Tiso_gene_4816|Tiso_gene_13477}}
{{#set: total reaction=3}}
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{{#set: in pathway=}}
{{#set: completion rate=67.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:23, 21 March 2018

Reaction RXN-16997

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cytoplasmic
    • pgm_pmm
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links