Difference between revisions of "Tiso gene 7167"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P184-PWY P184-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-12...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P184-PWY P184-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/5.3.1.24 EC-5.3.1.24]
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** protocatechuate degradation I (meta-cleavage pathway)
 
* Synonym(s):
 
* Synonym(s):
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** protocatechuate degradation via meta-cleavage
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** protocatechuate 4,5-cleavage
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''8''' reactions in the full pathway
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** 1 [[N-5-PHOSPHORIBOSYL-ANTHRANILATE]][c] '''=>''' 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c]
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* [[OXALODECARB-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 N-(5-phosphoribosyl)-anthranilate[c] '''=>''' 1 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate[c]
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*** [[Tiso_gene_12200]]
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*** [[Tiso_gene_12896]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_10297]]
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== Reaction(s) not found ==
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.45-RXN 1.2.1.45-RXN]
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** [[pantograph]]-[[creinhardtii]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-45-DIOXYGENASE-RXN PROTOCATECHUATE-45-DIOXYGENASE-RXN]
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* [[Tiso_gene_10298]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R107-RXN R107-RXN]
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2462 RXN-2462]
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** [[pantograph]]-[[creinhardtii]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2463 RXN-2463]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2464 RXN-2464]
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* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9983 RXN-9983]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-1224}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21540 21540]
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{{#set: common name=protocatechuate degradation I (meta-cleavage pathway)}}
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* LIGAND-RXN:
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{{#set: common name=protocatechuate degradation via meta-cleavage|protocatechuate 4,5-cleavage}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03509 R03509]
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{{#set: reaction found=1}}
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* UNIPROT:
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{{#set: total reaction=8}}
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** [http://www.uniprot.org/uniprot/P16923 P16923]
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{{#set: completion rate=13.0}}
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** [http://www.uniprot.org/uniprot/O67853 O67853]
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** [http://www.uniprot.org/uniprot/P12289 P12289]
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** [http://www.uniprot.org/uniprot/P42393 P42393]
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** [http://www.uniprot.org/uniprot/Q9PIF3 Q9PIF3]
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** [http://www.uniprot.org/uniprot/Q57893 Q57893]
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** [http://www.uniprot.org/uniprot/P20167 P20167]
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** [http://www.uniprot.org/uniprot/Q9JVD1 Q9JVD1]
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** [http://www.uniprot.org/uniprot/P00910 P00910]
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** [http://www.uniprot.org/uniprot/P00909 P00909]
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** [http://www.uniprot.org/uniprot/P00912 P00912]
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** [http://www.uniprot.org/uniprot/P13997 P13997]
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** [http://www.uniprot.org/uniprot/P50857 P50857]
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** [http://www.uniprot.org/uniprot/P27710 P27710]
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** [http://www.uniprot.org/uniprot/P17218 P17218]
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** [http://www.uniprot.org/uniprot/P00908 P00908]
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** [http://www.uniprot.org/uniprot/P18483 P18483]
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** [http://www.uniprot.org/uniprot/Q02002 Q02002]
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** [http://www.uniprot.org/uniprot/Q56320 Q56320]
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** [http://www.uniprot.org/uniprot/Q01128 Q01128]
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** [http://www.uniprot.org/uniprot/P74435 P74435]
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** [http://www.uniprot.org/uniprot/Q9YGB1 Q9YGB1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-5.3.1.24}}
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{{#set: gene associated=Tiso_gene_10297|Tiso_gene_10298}}
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{{#set: in pathway=TRPSYN-PWY}}
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{{#set: reconstruction category=orthology|manual}}
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{{#set: reconstruction source=manual-primary_network|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:25, 21 March 2018

Pathway P184-PWY

  • taxonomic range:
  • common name:
    • protocatechuate degradation I (meta-cleavage pathway)
  • Synonym(s):
    • protocatechuate degradation via meta-cleavage
    • protocatechuate 4,5-cleavage

Reaction(s) found

1 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7167&oldid=34078"