Difference between revisions of "PRICI"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNKIN-RXN MANNKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hexokinase * ec number:...")
(Created page with "Category:Gene == Gene Tiso_gene_19389 == * right end position: ** 2356 * transcription direction: ** POSITIVE * left end position: ** 344 * centisome position: ** 14.55160...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNKIN-RXN MANNKIN-RXN] ==
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== Gene Tiso_gene_19389 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 2356
* common name:
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* transcription direction:
** hexokinase
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** POSITIVE
* ec number:
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* left end position:
** [http://enzyme.expasy.org/EC/2.7.1.7 EC-2.7.1.7]
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** 344
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* centisome position:
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** 14.551607   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[GCVT-RXN]]
** 1 [[ATP]][c] '''+''' 1 [[D-mannopyranose]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15979]][c] '''+''' 1 [[ADP]][c]
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* With common name(s):
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** 1 ATP[c] '''+''' 1 D-mannopyranose[c] '''=>''' 1 H+[c] '''+''' 1 D-mannopyranose 6-phosphate[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3107]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_1303]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-6140]], CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6140 PWY-6140]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6992]], 1,5-anhydrofructose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6992 PWY-6992]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-3861]], mannitol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3861 PWY-3861]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
 +
* [[GLYCLEAV-PWY]]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: right end position=2356}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11028 11028]
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{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
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{{#set: left end position=344}}
** [http://www.genome.jp/dbget-bin/www_bget?R01326 R01326]
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{{#set: centisome position=14.551607    }}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=GCVT-RXN}}
{{#set: common name=hexokinase}}
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{{#set: pathway associated=GLYCLEAV-PWY}}
{{#set: ec number=EC-2.7.1.7}}
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{{#set: gene associated=Tiso_gene_3107|Tiso_gene_1303}}
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{{#set: in pathway=PWY-6140|PWY-6992|PWY-3861}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:27, 21 March 2018

Gene Tiso_gene_19389

  • right end position:
    • 2356
  • transcription direction:
    • POSITIVE
  • left end position:
    • 344
  • centisome position:
    • 14.551607
  • Synonym(s):

Reactions associated

Pathways associated

External links