Difference between revisions of "RXN1F-165"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Gene == Gene Tiso_gene_2068 == * right end position: ** 3029 * transcription direction: ** POSITIVE * left end position: ** 1 * centisome position: ** 4.829518200...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318] ==
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== Gene Tiso_gene_2068 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** 3029
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* common name:
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* transcription direction:
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** L-phenylalanine degradation IV (mammalian, via side chain)
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** POSITIVE
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* left end position:
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** 1
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* centisome position:
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** 4.829518200e-3
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''4''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[ATPASE-RXN]]
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* [[PHENDEHYD-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 0 associated gene:
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*** Assignment: ec-number
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* [[RXN-10814]]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** 6 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_13538]]
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*** Assignment: ec-number
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*** [[Tiso_gene_17809]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_12889]]
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*** Assignment: ec-number
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*** [[Tiso_gene_6815]]
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* Reaction: [[RXN-12195]]
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*** [[Tiso_gene_15680]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_17718]]
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*** Assignment: ec-number
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** 4 reconstruction source(s) associated:
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** Source: [[annotation-experimental_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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*** [[manual-primary_network]]
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* Reaction: [[RXN-12196]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: ec-number
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* [[RXN-10815]]
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** Source: [[annotation-experimental_annotation]]
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** 3 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_18328]]
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* Reaction: [[RXN0-5462]]
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*** [[Tiso_gene_18976]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_18977]]
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*** Assignment: ec-number
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: ec-number
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*** [[annotation-in-silico_annotation]]
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== Pathways associated ==
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*** [[orthology-esiliculosus]]
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* [[PWY-7184]]
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* [[RXN-10821]]
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* [[PWY-7198]]
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** 1 associated gene(s):
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* [[PWY-6545]]
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*** [[Tiso_gene_7195]]
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* [[PWY-7210]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINE-N-PHENYLACETYLTRANSFERASE-RXN GLUTAMINE-N-PHENYLACETYLTRANSFERASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE-DECARBOXYLASE-RXN PHENYLALANINE-DECARBOXYLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10816 RXN-10816]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10817 RXN-10817]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10819 RXN-10819]
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== External links  ==
 
== External links  ==
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* LIGAND-MAP:
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{{#set: right end position=3029}}
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** [http://www.genome.jp/dbget-bin/www_bget?map00360 map00360]
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-33208}}
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{{#set: left end position=1}}
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{{#set: common name=L-phenylalanine degradation IV (mammalian, via side chain)}}
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{{#set: centisome position=4.829518200e-3}}
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{{#set: reaction found=4}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: total reaction=9}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: completion rate=44.0}}
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Revision as of 16:27, 21 March 2018

Gene Tiso_gene_2068

  • right end position:
    • 3029
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1
  • centisome position:
    • 4.829518200e-3
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN1F-165&oldid=34236"