Difference between revisions of "NICOTINAMIDE NUCLEOTIDE"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GAMMA-LINOLENOYL-COA GAMMA-LINOLENOYL-COA] == * smiles: ** CCCCCC=CCC=CCC=CCCCCC(=O)SCCNC(=O)CC...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11842 RXN-11842] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridine_synthase...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GAMMA-LINOLENOYL-COA GAMMA-LINOLENOYL-COA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11842 RXN-11842] ==
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* smiles:
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* direction:
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** CCCCCC=CCC=CCC=CCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=XZQYPTBYQYZGRU-FHDVEODPSA-J
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* common name:
 
* common name:
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** γ-linolenoyl-CoA
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** trna_pseudouridine_synthase
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* molecular weight:
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** trna_pseudouridinesynthase
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** 1023.921   
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* ec number:
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** [http://enzyme.expasy.org/EC/5.4.99.28 EC-5.4.99.28]
 
* Synonym(s):
 
* Synonym(s):
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** (6Z,9Z,12Z)-octadeca-6,9,12-trienoyl-CoA
 
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** (6Z,9Z,12Z)-octadecatrienoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[1.14.19.3-RXN]]
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** 1 [[Uridine32-in-tRNA]][c] '''=>''' 1 [[tRNA-pseudouridine32]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 a uridine32 in tRNA[c] '''=>''' 1 a pseudouridine32 in tRNA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_2988]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_9833]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4020]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_18959]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4021]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_11913]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_19622]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03035 C03035]
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{{#set: common name=trna_pseudouridine_synthase}}
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* CHEBI:
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{{#set: common name=trna_pseudouridinesynthase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57363 57363]
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{{#set: ec number=EC-5.4.99.28}}
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* METABOLIGHTS : MTBLC57363
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{{#set: gene associated=Tiso_gene_2988|Tiso_gene_9833|Tiso_gene_4020|Tiso_gene_18959|Tiso_gene_4021|Tiso_gene_11913|Tiso_gene_19622}}
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* PUBCHEM:
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{{#set: in pathway=}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266591 45266591]
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{{#set: reconstruction category=annotation}}
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* HMDB : HMDB06368
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: smiles=CCCCCC=CCC=CCC=CCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=XZQYPTBYQYZGRU-FHDVEODPSA-J}}
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{{#set: common name=γ-linolenoyl-CoA}}
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{{#set: molecular weight=1023.921    }}
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{{#set: common name=(6Z,9Z,12Z)-octadeca-6,9,12-trienoyl-CoA|(6Z,9Z,12Z)-octadecatrienoyl-CoA}}
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{{#set: produced by=1.14.19.3-RXN}}
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Revision as of 15:27, 21 March 2018

Reaction RXN-11842

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trna_pseudouridine_synthase
    • trna_pseudouridinesynthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=NICOTINAMIDE_NUCLEOTIDE&oldid=34245"