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Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] == | + | == Gene Tiso_gene_1521 == |
| − | * direction: | + | * right end position: |
| − | ** LEFT-TO-RIGHT | + | ** 9148 |
| − | * common name: | + | * transcription direction: |
| − | ** 2,3-Dihydroxy-3-methylvalerate dehydratase | + | ** NEGATIVE |
| − | * ec number: | + | * left end position: |
| − | ** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9] | + | ** 155 |
| | + | * centisome position: |
| | + | ** 0.65999573 |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * Reaction: [[2.4.2.31-RXN]] |
| − | ** 1 [[1-KETO-2-METHYLVALERATE]][c] '''=>''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[WATER]][c]
| + | ** Source: [[annotation-in-silico_annotation]] |
| − | * With common name(s):
| + | *** Assignment: ec-number |
| − | ** 1 (R)-2,3-dihydroxy-3-methylpentanoate[c] '''=>''' 1 (S)-3-methyl-2-oxopentanoate[c] '''+''' 1 H2O[c]
| + | == Pathways associated == |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_1563]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
| + | |
| − | ** '''4''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
| + | |
| − | ** '''7''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
| + | |
| − | ** '''5''' reactions found over '''8''' reactions in the full pathway | + | |
| − | * [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104] | + | |
| − | ** '''3''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-creinhardtii]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-synechocystis]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[manual]]
| + | |
| − | ** Source: [[manual-primary_network]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: right end position=9148}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27694 27694]
| + | {{#set: transcription direction=NEGATIVE}} |
| − | * LIGAND-RXN:
| + | {{#set: left end position=155}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R05070 R05070]
| + | {{#set: centisome position=0.65999573 }} |
| − | * UNIPROT:
| + | {{#set: reaction associated=2.4.2.31-RXN}} |
| − | ** [http://www.uniprot.org/uniprot/P55186 P55186]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JUE0 Q9JUE0]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P05791 P05791]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9UZ03 Q9UZ03]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P44851 P44851]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q02139 Q02139]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PJ98 Q9PJ98]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P39522 P39522]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=2,3-Dihydroxy-3-methylvalerate dehydratase}} | + | |
| − | {{#set: ec number=EC-4.2.1.9}} | + | |
| − | {{#set: gene associated=Tiso_gene_1563}} | + | |
| − | {{#set: in pathway=PWY-5103|ILEUSYN-PWY|PWY-5101|PWY-5104}} | + | |
| − | {{#set: reconstruction category=orthology|manual|annotation}}
| + | |
| − | {{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
