Difference between revisions of "PWY-7761"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1084 RXN1G-1084] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carri...")
(Created page with "Category:Gene == Gene Tiso_gene_13681 == * right end position: ** 6023 * transcription direction: ** NEGATIVE * left end position: ** 2059 * centisome position: ** 33.5069...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1084 RXN1G-1084] ==
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== Gene Tiso_gene_13681 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6023
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* common name:
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* transcription direction:
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** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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** 2059
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* centisome position:
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** 33.506916   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[cis-delta19-3-hydroxyC38-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[trans-D2-cis-D19-C38-ACPs]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a cis-delta19-3-hydroxyC38:1-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a trans-delta2-cis-delta19-C38:2-[acp][c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_6884]]
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** Source: [[annotation-in-silico_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-12196]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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*** Assignment: ec-number
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** '''86''' reactions found over '''182''' reactions in the full pathway
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* Reaction: [[RXN0-5462]]
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== Reconstruction information  ==
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** Source: [[annotation-in-silico_annotation]]
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* Category: [[annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6023}}
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{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: left end position=2059}}
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{{#set: gene associated=Tiso_gene_6884}}
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{{#set: centisome position=33.506916    }}
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{{#set: in pathway=PWYG-321}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: reconstruction source=annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 16:27, 21 March 2018

Gene Tiso_gene_13681

  • right end position:
    • 6023
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2059
  • centisome position:
    • 33.506916
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7761&oldid=34284"