Difference between revisions of "TRANS-RXN-218"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-22...")
(Created page with "Category:Gene == Gene Tiso_gene_13520 == * right end position: ** 4471 * transcription direction: ** POSITIVE * left end position: ** 4107 * centisome position: ** 65.7751...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Gene]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] ==
+
== Gene Tiso_gene_13520 ==
−
* taxonomic range:
+
* right end position:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
+
** 4471
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
+
* transcription direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
+
** POSITIVE
−
* common name:
+
* left end position:
−
** incomplete reductive TCA cycle
+
** 4107
 +
* centisome position:
 +
** 65.77515   
 
* Synonym(s):
 
* Synonym(s):
−
** citric acid cycle variant
 
−
** tricarboxylic acid cycle variant
 
−
** TCA cycle variation I
 
−
** incomplete reductive tricarboxylic acid cycle
 
  
−
== Reaction(s) found ==
+
== Reactions associated ==
−
'''4''' reactions found over '''7''' reactions in the full pathway
+
* Reaction: [[ATPASE-RXN]]
−
* [[FUMHYDR-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
−
** 2 associated gene(s):
+
*** Assignment: ec-number
−
*** [[Tiso_gene_6720]]
+
== Pathways associated ==
−
*** [[Tiso_gene_3691]]
+
−
** 6 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
* [[MALATE-DEH-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_1990]]
+
−
*** [[Tiso_gene_2323]]
+
−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
* [[PYRUVATE-CARBOXYLASE-RXN]]
+
−
** 3 associated gene(s):
+
−
*** [[Tiso_gene_15144]]
+
−
*** [[Tiso_gene_2812]]
+
−
*** [[Tiso_gene_15145]]
+
−
** 4 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[manual-primary_network]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[SUCCCOASYN-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_15846]]
+
−
*** [[Tiso_gene_11866]]
+
−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
== Reaction(s) not found ==
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-224756}}
+
{{#set: right end position=4471}}
−
{{#set: taxonomic range=TAX-183939}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: taxonomic range=TAX-183925}}
+
{{#set: left end position=4107}}
−
{{#set: common name=incomplete reductive TCA cycle}}
+
{{#set: centisome position=65.77515    }}
−
{{#set: common name=citric acid cycle variant|tricarboxylic acid cycle variant|TCA cycle variation I|incomplete reductive tricarboxylic acid cycle}}
+
{{#set: reaction associated=ATPASE-RXN}}
−
{{#set: reaction found=4}}
+
−
{{#set: total reaction=7}}
+
−
{{#set: completion rate=57.0}}
+

Revision as of 16:27, 21 March 2018

Gene Tiso_gene_13520

  • right end position:
    • 4471
  • transcription direction:
    • POSITIVE
  • left end position:
    • 4107
  • centisome position:
    • 65.77515
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRANS-RXN-218&oldid=34301"