Difference between revisions of "Tiso gene 6738"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=NAGLIPASYN-PWY NAGLIPASYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13298 RXN-13298] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=NAGLIPASYN-PWY NAGLIPASYN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13298 RXN-13298] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** lipid IVA biosynthesis
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** chloroplast_beta-keto_acyl_reductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
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** lipid-A-precursor biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[LIPIDADISACCHARIDESYNTH-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[CPD-14271]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-14275]][c] '''+''' 1 [[NADP]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_6736]]
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** 1 NADPH[c] '''+''' 1 3-oxoicosanoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 (3R)-3-hydroxy-arachidoyl-CoA[c] '''+''' 1 NADP+[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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* [[TETRAACYLDISACC4KIN-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 associated gene(s):
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* Gene: [[Tiso_gene_9871]]
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*** [[Tiso_gene_8779]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_8780]]
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*** Assignment: EC-NUMBER
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* [[UDPACYLGLCNACDEACETYL-RXN]]
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== Pathways  ==
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** 1 associated gene(s):
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* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
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*** [[Tiso_gene_19583]]
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** '''16''' reactions found over '''16''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[orthology-synechocystis]]
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* Category: [[annotation]]
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* [[UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN]]
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** Source: [[annotation-experimental_annotation]]
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** 1 associated gene(s):
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_2638]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[orthology-synechocystis]]
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* [[UDPNACETYLGLUCOSAMACYLTRANS-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_19198]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=LIPIDXSYNTHESIS-RXN LIPIDXSYNTHESIS-RXN]
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== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=NAGLIPASYN-PWY NAGLIPASYN-PWY]
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: ec number=EC-1.1.1.330}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: gene associated=Tiso_gene_9871}}
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{{#set: common name=lipid IVA biosynthesis}}
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{{#set: in pathway=PWY-7036}}
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{{#set: common name=lipid-A-precursor biosynthesis}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction found=5}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: total reaction=6}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: completion rate=83.0}}
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Revision as of 15:28, 21 March 2018

Reaction RXN-13298

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 3-oxoicosanoyl-CoA[c] + 1 H+[c] => 1 (3R)-3-hydroxy-arachidoyl-CoA[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7036, very long chain fatty acid biosynthesis II: PWY-7036
    • 16 reactions found over 16 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6738&oldid=34312"