Difference between revisions of "Tiso gene 4020"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6908 PWY-6908] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16134 RXN-16134] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase * e...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6908 PWY-6908] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16134 RXN-16134] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33630 TAX-33630]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
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** thiamine diphosphate biosynthesis IV (eukaryotes)
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** acyl-coenzyme_a_oxidase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
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** thiamin diphosphate biosynthesis IV (eukaryotes)
 
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** vitamin B1 biosynthesis IV (eukaryotes)
 
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** thiamine diphosphate biosynthesis (plants)
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[RXNQT-4191]]
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** 1 [[CPD-17385]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-17386]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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** 5 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_17610]]
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** 1 (6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
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*** [[Tiso_gene_4497]]
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*** [[Tiso_gene_15256]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_17625]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_11838]]
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* Gene: [[Tiso_gene_18566]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: EC-NUMBER
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* [[THI-P-SYN-RXN]]
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== Pathways  ==
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** 3 associated gene(s):
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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*** [[Tiso_gene_10320]]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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*** [[Tiso_gene_2159]]
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== Reconstruction information  ==
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*** [[Tiso_gene_2160]]
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* Category: [[annotation]]
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Tool: [[pathwaytools]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** Tool: [[pathwaytools]]
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* [[THIAMIN-PYROPHOSPHOKINASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_16512]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33630}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: ec number=EC-1.3.3.6}}
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{{#set: common name=thiamine diphosphate biosynthesis IV (eukaryotes)}}
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{{#set: gene associated=Tiso_gene_18566}}
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{{#set: common name=thiamin diphosphate biosynthesis IV (eukaryotes)|vitamin B1 biosynthesis IV (eukaryotes)|thiamine diphosphate biosynthesis (plants)}}
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{{#set: in pathway=PWY-7606}}
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{{#set: reaction found=3}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=3}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:30, 21 March 2018

Reaction RXN-16134

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] + 1 oxygen[c] => 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] + 1 hydrogen peroxide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4020&oldid=34563"