Difference between revisions of "URKI-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13182 RXN-13182] == * direction: ** LEFT-TO-RIGHT * common name: ** sialate_o-acetylesterase-li...")
(Created page with "Category:Gene == Gene Tiso_gene_13698 == * right end position: ** 5717 * transcription direction: ** POSITIVE * left end position: ** 1601 * centisome position: ** 26.0834...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13182 RXN-13182] ==
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== Gene Tiso_gene_13698 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5717
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* common name:
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* transcription direction:
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** sialate_o-acetylesterase-like_protein
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** POSITIVE
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** ORF
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* left end position:
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* ec number:
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** 1601
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** [http://enzyme.expasy.org/EC/3.1.1.53 EC-3.1.1.53]
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* centisome position:
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** 26.083416   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[LEUCYLTRANSFERASE-RXN]]
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** 1 [[N-ACETYL-9-O-ACETYLNEURAMINATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[N-ACETYLNEURAMINATE]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 N-acetyl-9-O-acetylneuraminate[c] '''+''' 1 H2O[c] '''=>''' 1 acetate[c] '''+''' 1 N-acetylneuraminate[c] '''+''' 1 H+[c]
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* Reaction: [[RXN-17846]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-17847]]
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* [[Tiso_gene_4418]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-17848]]
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* [[Tiso_gene_17029]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4419]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7801]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5717}}
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{{#set: common name=sialate_o-acetylesterase-like_protein}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ORF}}
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{{#set: left end position=1601}}
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{{#set: ec number=EC-3.1.1.53}}
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{{#set: centisome position=26.083416    }}
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{{#set: gene associated=Tiso_gene_4418|Tiso_gene_17029|Tiso_gene_4419}}
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{{#set: reaction associated=LEUCYLTRANSFERASE-RXN|RXN-17846|RXN-17847|RXN-17848}}
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{{#set: in pathway=}}
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{{#set: pathway associated=PWY-7801}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 16:31, 21 March 2018

Gene Tiso_gene_13698

  • right end position:
    • 5717
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1601
  • centisome position:
    • 26.083416
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=URKI-RXN&oldid=34629"