Difference between revisions of "Tiso gene 450"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLORNTRANSAM-RXN ACETYLORNTRANSAM-RXN] == * direction: ** REVERSIBLE * common name: ** acetylor...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8346 RXN-8346] == * direction: ** LEFT-TO-RIGHT * common name: ** di-homo-γ-linolenate &D...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLORNTRANSAM-RXN ACETYLORNTRANSAM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8346 RXN-8346] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acetylornithine_aminotransferase
+
** di-homo-γ-linolenate Δ5 desaturase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.11 EC-2.6.1.11]
+
** [http://enzyme.expasy.org/EC/1.14.19.30 EC-1.14.19.30]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[N-ALPHA-ACETYLORNITHINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[CPD-469]][c] '''+''' 1 [[GLT]][c]
+
** 2 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-17283]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[CPD-17284]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 N-acetyl-L-ornithine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 N-acetyl-L-glutamate 5-semialdehyde[c] '''+''' 1 L-glutamate[c]
+
** 2 H+[c] '''+''' 1 oxygen[c] '''+''' 1 a [glycerolipid]-di-homo-&gamma;-linolenate[c] '''+''' 2 a ferrocytochrome b5[c] '''=>''' 2 H2O[c] '''+''' 2 a ferricytochrome b5[c] '''+''' 1 a [glycerolipid]-arachidonate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_11231]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
** [[pantograph]]-[[synechocystis]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
+
* [[PWY-5353]], arachidonate biosynthesis I (6-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5353 PWY-5353]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[GLUTORN-PWY]], L-ornithine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTORN-PWY GLUTORN-PWY]
+
* [[PWY-7601]], arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7601 PWY-7601]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18049 18049]
+
{{#set: common name=di-homo-&gamma;-linolenate &Delta;5 desaturase}}
−
* LIGAND-RXN:
+
{{#set: ec number=EC-1.14.19.30}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02283 R02283]
+
{{#set: in pathway=PWY-5353|PWY-7601}}
−
* UNIPROT:
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P18335 P18335]
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
** [http://www.uniprot.org/uniprot/Q9PIR7 Q9PIR7]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q9JTX9 Q9JTX9]
+
−
** [http://www.uniprot.org/uniprot/Q9CHD3 Q9CHD3]
+
−
** [http://www.uniprot.org/uniprot/P30900 P30900]
+
−
** [http://www.uniprot.org/uniprot/P18544 P18544]
+
−
** [http://www.uniprot.org/uniprot/O74548 O74548]
+
−
** [http://www.uniprot.org/uniprot/O14433 O14433]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=acetylornithine_aminotransferase}}
+
−
{{#set: ec number=EC-2.6.1.11}}
+
−
{{#set: gene associated=Tiso_gene_11231}}
+
−
{{#set: in pathway=PWY-5154|GLUTORN-PWY|ARGSYNBSUB-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 16:32, 21 March 2018

Reaction RXN-8346

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • di-homo-γ-linolenate Δ5 desaturase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-5353, arachidonate biosynthesis I (6-desaturase, lower eukaryotes): PWY-5353
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-7601, arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): PWY-7601
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_450&oldid=34734"