Difference between revisions of "Tiso gene 886"

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(Created page with "Category:Gene == Gene Tiso_gene_450 == * left end position: ** 27086 * transcription direction: ** POSITIVE * right end position: ** 29312 * centisome position: ** 81.0642...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16020 RXN-16020] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_450 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16020 RXN-16020] ==
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* left end position:
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* direction:
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** 27086
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** chloroplast_beta-keto_acyl_reductase
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* right end position:
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* ec number:
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** 29312
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
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* centisome position:
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** 81.064255   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[NAD+-ADP-RIBOSYLTRANSFERASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-17262]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[CPD-17263]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 H+[c] '''+''' 1 3-oxo-icosatetraenoyl-CoA[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 (8Z,11Z,14Z,17Z)-3-hydroxy-icosa-8,11,14,17-tetraenoyl-CoA[c] '''+''' 1 NAD(P)+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9871]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7049 PWY-7049]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=27086}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: right end position=29312}}
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{{#set: ec number=EC-1.1.1.330}}
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{{#set: centisome position=81.064255    }}
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{{#set: gene associated=Tiso_gene_9871}}
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{{#set: reaction associated=NAD+-ADP-RIBOSYLTRANSFERASE-RXN}}
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{{#set: in pathway=PWY-7049|PWY-6958}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:32, 21 March 2018

Reaction RXN-16020

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 3-oxo-icosatetraenoyl-CoA[c] + 1 NAD(P)H[c] => 1 (8Z,11Z,14Z,17Z)-3-hydroxy-icosa-8,11,14,17-tetraenoyl-CoA[c] + 1 NAD(P)+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7049, icosapentaenoate biosynthesis II (6-desaturase, mammals): PWY-7049
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6958, icosapentaenoate biosynthesis I (lower eukaryotes): PWY-6958
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_886&oldid=34758"