Difference between revisions of "Rhodopsins"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUMP DUMP] == * smiles: ** C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2)) * inchi key: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTCY GTCY] == * direction: ** LEFT-TO-RIGHT * common name: ** GTP:cytidine 5'-phosphotransferase *...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUMP DUMP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTCY GTCY] ==
* smiles:
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* direction:
** C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))
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** LEFT-TO-RIGHT
* inchi key:
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** InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-L
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* common name:
 
* common name:
** dUMP
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** GTP:cytidine 5'-phosphotransferase
* molecular weight:
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** 306.168   
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* Synonym(s):
 
* Synonym(s):
** deoxyurdine-phosphate
 
** 2'-deoxyuridine 5-monophosphate
 
** deoxyuridine-phosphate
 
** 2'-deoxyuridine 5'-phosphate
 
** 2'-deoxyuridylic acid
 
** 2'-deoxy-5'-uridylic acid
 
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[RXN-14143]]
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* With identifiers:
* [[THYMIDYLATESYN-RXN]]
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** 1.0 [[GTP]][c] '''+''' 1.0 [[CYTIDINE]][c] '''=>''' 1.0 [[GDP]][c] '''+''' 1.0 [[CMP]][c] '''+''' 1.0 [[PROTON]][c]
== Reaction(s) known to produce the compound ==
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* With common name(s):
* [[RXN-14220]]
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** 1.0 GTP[c] '''+''' 1.0 cytidine[c] '''=>''' 1.0 GDP[c] '''+''' 1.0 CMP[c] '''+''' 1.0 H+[c]
* [[RXN-14199]]
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* [[DUTP-PYROP-RXN]]
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== Genes associated with this reaction  ==
* [[DUTNH]]
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Genes have been associated with this reaction based on different elements listed below.
* [[DCMP-DEAMINASE-RXN]]
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* Gene: [[Tiso_gene_14474]]
== Reaction(s) of unknown directionality ==
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_20134]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* CAS : 964-26-1
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{{#set: direction=LEFT-TO-RIGHT}}
* METABOLIGHTS : MTBLC246422
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{{#set: common name=GTP:cytidine 5'-phosphotransferase}}
* PUBCHEM:
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{{#set: gene associated=Tiso_gene_14474|Tiso_gene_20134}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=18601100 18601100]
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{{#set: in pathway=}}
* HMDB : HMDB01409
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{{#set: reconstruction category=orthology}}
* LIGAND-CPD:
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{{#set: reconstruction source=orthology-creinhardtii}}
** [http://www.genome.jp/dbget-bin/www_bget?C00365 C00365]
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{{#set: reconstruction tool=pantograph}}
* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.18555972.html 18555972]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=246422 246422]
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* BIGG : dump
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{{#set: smiles=C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))}}
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{{#set: inchi key=InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-L}}
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{{#set: common name=dUMP}}
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{{#set: molecular weight=306.168    }}
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{{#set: common name=deoxyurdine-phosphate|2'-deoxyuridine 5-monophosphate|deoxyuridine-phosphate|2'-deoxyuridine 5'-phosphate|2'-deoxyuridylic acid|2'-deoxy-5'-uridylic acid}}
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{{#set: consumed by=RXN-14143|THYMIDYLATESYN-RXN}}
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{{#set: produced by=RXN-14220|RXN-14199|DUTP-PYROP-RXN|DUTNH|DCMP-DEAMINASE-RXN}}
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Revision as of 16:33, 21 March 2018

Reaction GTCY

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • GTP:cytidine 5'-phosphotransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 GTP[c] + 1.0 cytidine[c] => 1.0 GDP[c] + 1.0 CMP[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links