Difference between revisions of "Protein-formylglycine"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.18-RXN 3.4.11.18-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopep...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R03845 R03845] == * direction: ** LEFT-TO-RIGHT * common name: ** R127 * Synonym(s): == Reaction F...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.18-RXN 3.4.11.18-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R03845 R03845] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** methionine_aminopeptidase
+
** R127
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[Protein-With-N-Terminal-Met]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Peptides-holder]][c] '''+''' 1 [[MET]][c]
+
** 1.0 [[PROTON]][c] '''+''' 1.0 [[MONO-VINYL-PROTOCHLOROPHYLLIDE-A]][c] '''+''' 1.0 [[NADPH]][c] '''=>''' 1.0 [[Chlorophyllides]][c] '''+''' 1.0 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a peptide with an N-terminal L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 a peptide[c] '''+''' 1 L-methionine[c]
+
** 1.0 H+[c] '''+''' 1.0 protochlorophyllide a[c] '''+''' 1.0 NADPH[c] '''=>''' 1.0 a chlorophyllide[c] '''+''' 1.0 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3182]]
+
* Gene: [[Tiso_gene_10077]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-synechocystis]]
−
* [[Tiso_gene_5715]]
+
* Gene: [[Tiso_gene_17141]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-synechocystis]]
−
***AUTOMATED-NAME-MATCH
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4247]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[orthology-synechocystis]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P38062 P38062]
 
−
** [http://www.uniprot.org/uniprot/P47418 P47418]
 
−
** [http://www.uniprot.org/uniprot/Q9PM25 Q9PM25]
 
−
** [http://www.uniprot.org/uniprot/P28617 P28617]
 
−
** [http://www.uniprot.org/uniprot/P44421 P44421]
 
−
** [http://www.uniprot.org/uniprot/Q9UYT4 Q9UYT4]
 
−
** [http://www.uniprot.org/uniprot/P0AE18 P0AE18]
 
−
** [http://www.uniprot.org/uniprot/P50579 P50579]
 
−
** [http://www.uniprot.org/uniprot/Q9JWK1 Q9JWK1]
 
−
** [http://www.uniprot.org/uniprot/Q58725 Q58725]
 
−
** [http://www.uniprot.org/uniprot/P56218 P56218]
 
−
** [http://www.uniprot.org/uniprot/P19994 P19994]
 
−
** [http://www.uniprot.org/uniprot/P22624 P22624]
 
−
** [http://www.uniprot.org/uniprot/P0A1X6 P0A1X6]
 
−
** [http://www.uniprot.org/uniprot/P41392 P41392]
 
−
** [http://www.uniprot.org/uniprot/Q59509 Q59509]
 
−
** [http://www.uniprot.org/uniprot/Q01662 Q01662]
 
−
** [http://www.uniprot.org/uniprot/P95963 P95963]
 
−
** [http://www.uniprot.org/uniprot/P53579 P53579]
 
−
** [http://www.uniprot.org/uniprot/P53581 P53581]
 
−
** [http://www.uniprot.org/uniprot/P53580 P53580]
 
−
** [http://www.uniprot.org/uniprot/Q9FV49 Q9FV49]
 
−
** [http://www.uniprot.org/uniprot/Q9Z9J4 Q9Z9J4]
 
−
** [http://www.uniprot.org/uniprot/Q9RKR2 Q9RKR2]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=methionine_aminopeptidase}}
+
{{#set: common name=R127}}
−
{{#set: ec number=EC-3.4.11.18}}
+
{{#set: gene associated=Tiso_gene_10077|Tiso_gene_17141}}
−
{{#set: gene associated=Tiso_gene_3182|Tiso_gene_5715|Tiso_gene_4247}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=orthology-synechocystis}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}

Revision as of 16:38, 21 March 2018

Reaction R03845

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • R127
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Protein-formylglycine&oldid=35345"