Difference between revisions of "Tiso gene 13149"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1225 RXN-1225] == * direction: ** LEFT-TO-RIGHT * common name: ** digalactosyldiacylglycerol_sy...")
(Created page with "Category:Gene == Gene Tiso_gene_16635 == * right end position: ** 3564 * transcription direction: ** POSITIVE * left end position: ** 31 * centisome position: ** 0.7330338...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1225 RXN-1225] ==
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== Gene Tiso_gene_16635 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3564
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* common name:
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* transcription direction:
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** digalactosyldiacylglycerol_synthase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.4.1.241 EC-2.4.1.241]
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** 31
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* centisome position:
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** 0.7330338   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[LYSINE--TRNA-LIGASE-RXN]]
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** 1 [[CPD-14553]][c] '''+''' 1 [[D-Galactosyl-12-diacyl-glycerols]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[Galactosyl-galactosyl-diacyl-glycerols]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 UDP-α-D-galactose[c] '''+''' 1 a 1,2-diacyl-3-O-(β-D-galactopyranosyl)-sn-glycerol[c] '''=>''' 1 UDP[c] '''+''' 1 an α,β-digalactosyldiacylglycerol[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2142]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11479]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_106]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-401]], galactolipid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-401 PWY-401]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7666]], galactolipid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7666 PWY-7666]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* Category: [[annotation]]
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* [[TRNA-CHARGING-PWY]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3564}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10520 10520]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=31}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04469 R04469]
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{{#set: centisome position=0.7330338    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=LYSINE--TRNA-LIGASE-RXN}}
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{{#set: common name=digalactosyldiacylglycerol_synthase}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: ec number=EC-2.4.1.241}}
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{{#set: gene associated=Tiso_gene_2142|Tiso_gene_11479|Tiso_gene_106}}
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{{#set: in pathway=PWY-401|PWY-7666}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:38, 21 March 2018

Gene Tiso_gene_16635

  • right end position:
    • 3564
  • transcription direction:
    • POSITIVE
  • left end position:
    • 31
  • centisome position:
    • 0.7330338
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13149&oldid=35367"