Difference between revisions of "Tiso gene 20412"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-methy...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10806 CPD-10806] == * smiles: ** CCCCCC(O)[CH]=CC=O * common name: ** 4-hydroxy-2-nonenal *...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10806 CPD-10806] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCC(O)[CH]=CC=O
 
* common name:
 
* common name:
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** 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
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** 4-hydroxy-2-nonenal
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** 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
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* inchi key:
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* ec number:
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** InChIKey=JVJFIQYAHPMBBX-FNORWQNLSA-N
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** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
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* molecular weight:
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** 156.224   
 
* Synonym(s):
 
* Synonym(s):
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** 4HNE
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-13673]]
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** 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[BCAA-dehydrogenase-3MB-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 H+[c] '''=>''' 1 a [apo BCAA dehydrogenase E2 protein] N6-S-[3-methylbutanoyl]dihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18084]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3260]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P21839 P21839]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5283344 5283344]
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** [http://www.uniprot.org/uniprot/P21953 P21953]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P37940 P37940]
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** [http://www.chemspider.com/Chemical-Structure.4446465.html 4446465]
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** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P37941 P37941]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=32585 32585]
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** [http://www.uniprot.org/uniprot/P11178 P11178]
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* METABOLIGHTS : MTBLC32585
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** [http://www.uniprot.org/uniprot/P12694 P12694]
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* HMDB : HMDB04362
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** [http://www.uniprot.org/uniprot/P09061 P09061]
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{{#set: smiles=CCCCCC(O)[CH]=CC=O}}
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** [http://www.uniprot.org/uniprot/P09060 P09060]
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{{#set: common name=4-hydroxy-2-nonenal}}
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** [http://www.uniprot.org/uniprot/P11960 P11960]
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{{#set: inchi key=InChIKey=JVJFIQYAHPMBBX-FNORWQNLSA-N}}
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** [http://www.uniprot.org/uniprot/O84344 O84344]
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{{#set: molecular weight=156.224    }}
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** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
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{{#set: common name=4HNE}}
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** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
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{{#set: consumed by=RXN-13673}}
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** [http://www.uniprot.org/uniprot/P35738 P35738]
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** [http://www.uniprot.org/uniprot/P50136 P50136]
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** [http://www.uniprot.org/uniprot/O48615 O48615]
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** [http://www.uniprot.org/uniprot/O03849 O03849]
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** [http://www.uniprot.org/uniprot/Q53592 Q53592]
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** [http://www.uniprot.org/uniprot/Q53593 Q53593]
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** [http://www.uniprot.org/uniprot/O82450 O82450]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=4-methyl-2-oxopentanoate dehydrogenase (lipoamide)}}
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{{#set: common name=2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial}}
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{{#set: ec number=EC-1.2.4.4}}
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{{#set: gene associated=Tiso_gene_18084|Tiso_gene_3260}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:39, 21 March 2018

Metabolite CPD-10806

  • smiles:
    • CCCCCC(O)[CH]=CC=O
  • common name:
    • 4-hydroxy-2-nonenal
  • inchi key:
    • InChIKey=JVJFIQYAHPMBBX-FNORWQNLSA-N
  • molecular weight:
    • 156.224
  • Synonym(s):
    • 4HNE

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • PUBCHEM:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC32585
  • HMDB : HMDB04362
"CCCCCC(O)[CH]=CC=O" cannot be used as a page name in this wiki.



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