Difference between revisions of "Charged-GLN-tRNAs"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-161 RXN-161] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.1.1 E...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12199 RXN-12199] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-161 RXN-161] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12199 RXN-12199] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
+
** [http://enzyme.expasy.org/EC/3.6.1.5 EC-3.6.1.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[BUTANOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[BUTANAL]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[UTP]][c] '''+''' 2 [[WATER]][c] '''=>''' 2 [[Pi]][c] '''+''' 1 [[UMP]][c] '''+''' 2 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 butan-1-ol[c] '''+''' 1 NAD+[c] '''<=>''' 1 butan-1-al[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
+
** 1 UTP[c] '''+''' 2 H2O[c] '''=>''' 2 phosphate[c] '''+''' 1 UMP[c] '''+''' 2 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_20236]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_12899]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6583]], pyruvate fermentation to butanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583]
+
* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185]
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
+
* [[PWY-7177]], UTP and CTP dephosphorylation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7177 PWY-7177]
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6883]], pyruvate fermentation to butanol II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33199 33199]
+
{{#set: common name=ORF}}
−
* LIGAND-RXN:
+
{{#set: ec number=EC-3.6.1.5}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03544 R03544]
+
{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: in pathway=PWY-7185|PWY-7177}}
−
{{#set: ec number=EC-1.1.1}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: in pathway=PWY-6583|PWY-7396|PWY-6883}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 16:43, 21 March 2018

Reaction RXN-12199

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UTP[c] + 2 H2O[c] => 2 phosphate[c] + 1 UMP[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7185, UTP and CTP dephosphorylation I: PWY-7185
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7177, UTP and CTP dephosphorylation II: PWY-7177
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Charged-GLN-tRNAs&oldid=35828"