Difference between revisions of "FRU1P"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_19578 == * left end position: ** 366 * transcription direction: ** NEGATIVE * right end position: ** 1422 * centisome position: ** 16.54611...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5-OXOPROLINASE-ATP-HYDROLYSING-RXN 5-OXOPROLINASE-ATP-HYDROLYSING-RXN] == * direction: ** LEFT-TO-R...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5-OXOPROLINASE-ATP-HYDROLYSING-RXN 5-OXOPROLINASE-ATP-HYDROLYSING-RXN] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** 5-oxoprolinase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/3.5.2.9 EC-3.5.2.9] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[1 | + | * With identifiers: |
| − | ** in-silico_annotation | + | ** 2 [[WATER]][c] '''+''' 1 [[5-OXOPROLINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] |
| − | *** | + | * With common name(s): |
| − | ** [[ | + | ** 2 H2O[c] '''+''' 1 5-oxo-L-proline[c] '''+''' 1 ATP[c] '''=>''' 1 phosphate[c] '''+''' 1 L-glutamate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c] |
| − | * [[ | + | |
| − | ** | + | == Genes associated with this reaction == |
| − | * | + | Genes have been associated with this reaction based on different elements listed below. |
| − | == | + | * Gene: [[Tiso_gene_3358]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_3359]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | ** Source: [[orthology-creinhardtii]] | ||
| + | == Pathways == | ||
| + | * [[PWY-4041]], γ-glutamyl cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4041 PWY-4041] | ||
| + | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-creinhardtii]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10348 10348] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00251 R00251] |
| − | {{#set: | + | * UNIPROT: |
| + | ** [http://www.uniprot.org/uniprot/P97608 P97608] | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=5-oxoprolinase}} | ||
| + | {{#set: ec number=EC-3.5.2.9}} | ||
| + | {{#set: gene associated=Tiso_gene_3358|Tiso_gene_3359}} | ||
| + | {{#set: in pathway=PWY-4041}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 16:43, 21 March 2018
Contents
Reaction 5-OXOPROLINASE-ATP-HYDROLYSING-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- 5-oxoprolinase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 2 H2O[c] + 1 5-oxo-L-proline[c] + 1 ATP[c] => 1 phosphate[c] + 1 L-glutamate[c] + 1 H+[c] + 1 ADP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_3358
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_3359
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
