Difference between revisions of "Tiso gene 12712"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1401 RXN0-1401] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phosphorylase * e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.99.4-RXN 4.1.99.4-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1401 RXN0-1401] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.99.4-RXN 4.1.99.4-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** thymidine_phosphorylase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.23 EC-2.7.4.23]
+
** [http://enzyme.expasy.org/EC/3.5.99.7 EC-3.5.99.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[RIBOSE-15-BISPHOSPHATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PRPP]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[CPD-68]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-OXOBUTANOATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 α-D-ribose 1,5-bisphosphate[c] '''+''' 1 ATP[c] '''=>''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 ADP[c]
+
** 1 1-aminocyclopropane-1-carboxylate[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 2-oxobutanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1011]]
+
* Gene: [[Tiso_gene_11198]]
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** IN-SILICO_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
+
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7805]], aminomethylphosphonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7805 PWY-7805]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY0-661]], PRPP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-661 PWY0-661]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7807]], glyphosate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7807 PWY-7807]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-creinhardtii]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20109 20109]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16933 16933]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06836 R06836]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00997 R00997]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9V2L2 Q9V2L2]
 +
** [http://www.uniprot.org/uniprot/Q9WY68 Q9WY68]
 +
** [http://www.uniprot.org/uniprot/P30297 P30297]
 +
** [http://www.uniprot.org/uniprot/Q7M523 Q7M523]
 +
** [http://www.uniprot.org/uniprot/Q9URX3 Q9URX3]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=thymidine_phosphorylase}}
+
{{#set: ec number=EC-3.5.99.7}}
−
{{#set: ec number=EC-2.7.4.23}}
+
{{#set: gene associated=Tiso_gene_11198}}
−
{{#set: gene associated=Tiso_gene_1011}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-7805|PWY0-661|PWY-7807}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 15:44, 21 March 2018

Reaction 4.1.99.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 1-aminocyclopropane-1-carboxylate[c] + 1 H2O[c] => 1 ammonium[c] + 1 2-oxobutanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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