Difference between revisions of "Tiso gene 8283"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10847 RXN-10847] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12200 RXN-12200] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10847 RXN-10847] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12200 RXN-12200] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
Line 6: Line 6:
 
** ORF
 
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.164 EC-2.1.1.164]
+
** [http://enzyme.expasy.org/EC/3.6.1.5 EC-3.6.1.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-11756]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-11752]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CTP]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[CMP]][c] '''+''' 2 [[Pi]][c] '''+''' 2 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 4'-O-demethylrebeccamycin[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 rebeccamycin[c] '''+''' 1 H+[c]
+
** 1 CTP[c] '''+''' 2 H2O[c] '''=>''' 1 CMP[c] '''+''' 2 phosphate[c] '''+''' 2 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7444]]
+
* Gene: [[Tiso_gene_20236]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_12899]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6324]], rebeccamycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6324 PWY-6324]
+
* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7177]], UTP and CTP dephosphorylation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7177 PWY-7177]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27353 27353]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R09569 R09569]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: ec number=EC-2.1.1.164}}
+
{{#set: ec number=EC-3.6.1.5}}
−
{{#set: gene associated=Tiso_gene_7444}}
+
{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
−
{{#set: in pathway=PWY-6324}}
+
{{#set: in pathway=PWY-7185|PWY-7177}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:44, 21 March 2018

Reaction RXN-12200

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 CTP[c] + 2 H2O[c] => 1 CMP[c] + 2 phosphate[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7185, UTP and CTP dephosphorylation I: PWY-7185
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7177, UTP and CTP dephosphorylation II: PWY-7177
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8283&oldid=35962"