Difference between revisions of "Tiso gene 1984"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11480 RXN-11480] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-carrier-pro...")
(Created page with "Category:Gene == Gene Tiso_gene_1588 == * right end position: ** 10692 * transcription direction: ** POSITIVE * left end position: ** 10009 * centisome position: ** 43.438...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11480 RXN-11480] ==
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== Gene Tiso_gene_1588 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 10692
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* common name:
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* transcription direction:
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** 3-oxoacyl-(acyl-carrier-protein)
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
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** 10009
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* centisome position:
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** 43.438072   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-15556]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-Ketopimeloyl-ACP-methyl-esters]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[3-hydroxypimeloyl-ACP-methyl-esters]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-pimeloyl-[acp] methyl ester[c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxypimeloyl-[acp] methyl ester[c]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9885]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13083]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
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** '''9''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7511]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=10692}}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: left end position=10009}}
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{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13083}}
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{{#set: centisome position=43.438072    }}
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{{#set: in pathway=PWY-6519}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:44, 21 March 2018

Gene Tiso_gene_1588

  • right end position:
    • 10692
  • transcription direction:
    • POSITIVE
  • left end position:
    • 10009
  • centisome position:
    • 43.438072
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1984&oldid=35999"