Difference between revisions of "Tiso gene 10757"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** adeno...")
(Created page with "Category:Gene == Gene Tiso_gene_4726 == * right end position: ** 7164 * transcription direction: ** NEGATIVE * left end position: ** 3337 * centisome position: ** 23.172...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] ==
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== Gene Tiso_gene_4726 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 7164
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* common name:
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* transcription direction:
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** adenosylmethionine-8-amino-7-oxononanoate_aminotransferase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/6.3.3.3 EC-6.3.3.3]
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** 3337
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* centisome position:
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** 23.172   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[DETHIOBIOTIN]][c] '''+''' 3 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 7,8-diaminopelargonate[c] '''+''' 1 ATP[c] '''+''' 1 CO2[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 dethiobiotin[c] '''+''' 3 H+[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_11635]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-12196]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
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*** Assignment: ec-number
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* Reaction: [[RXN0-5462]]
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* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=7164}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15805 15805]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=3337}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03182 R03182]
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{{#set: centisome position=23.172    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/Q9JV95 Q9JV95]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/Q9PIJ1 Q9PIJ1]
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** [http://www.uniprot.org/uniprot/P46397 P46397]
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** [http://www.uniprot.org/uniprot/P22818 P22818]
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** [http://www.uniprot.org/uniprot/P13000 P13000]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=adenosylmethionine-8-amino-7-oxononanoate_aminotransferase}}
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{{#set: ec number=EC-6.3.3.3}}
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{{#set: gene associated=Tiso_gene_11635}}
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{{#set: in pathway=PWY0-1507|PWY-7380}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 16:45, 21 March 2018

Gene Tiso_gene_4726

  • right end position:
    • 7164
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3337
  • centisome position:
    • 23.172
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10757&oldid=36054"