Difference between revisions of "INDOLE-3-GLYCOL"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.21-RXN 3.2.1.21-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-glucosidase-like...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14136 RXN-14136] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.21-RXN 3.2.1.21-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14136 RXN-14136] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** beta-glucosidase-like_chloroplastic
 
 
** ORF
 
** ORF
−
** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
 
−
** beta_glucosidase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
+
** [http://enzyme.expasy.org/EC/3.1.4.46 EC-3.1.4.46]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[Beta-D-glucosides]][c] '''=>''' 1 [[Non-Glucosylated-Glucose-Acceptors]][c] '''+''' 1 [[Glucopyranose]][c]
+
** 1 [[CPD0-2030]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[SER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a β-D glucoside[c] '''=>''' 1 a non glucosylated D-glucose acceptor[c] '''+''' 1 D-glucopyranose[c]
+
** 1 glycerophosphoserine[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''+''' 1 L-serine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2344]]
+
* Gene: [[Tiso_gene_17232]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_13305]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_5334]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
** EXPERIMENTAL_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
−
* [[Tiso_gene_10001]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13306]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_2843]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_8669]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6188]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15066]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6497]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5836]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6007]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6187]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3467]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15067]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P29091 P29091]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29878 29878]
−
** [http://www.uniprot.org/uniprot/P29090 P29090]
+
−
** [http://www.uniprot.org/uniprot/P27034 P27034]
+
−
** [http://www.uniprot.org/uniprot/P16084 P16084]
+
−
** [http://www.uniprot.org/uniprot/Q03506 Q03506]
+
−
** [http://www.uniprot.org/uniprot/Q23892 Q23892]
+
−
** [http://www.uniprot.org/uniprot/Q9CFI7 Q9CFI7]
+
−
** [http://www.uniprot.org/uniprot/P22507 P22507]
+
−
** [http://www.uniprot.org/uniprot/P33363 P33363]
+
−
** [http://www.uniprot.org/uniprot/Q9WXN2 Q9WXN2]
+
−
** [http://www.uniprot.org/uniprot/Q9CFL0 Q9CFL0]
+
−
** [http://www.uniprot.org/uniprot/Q9CJ31 Q9CJ31]
+
−
** [http://www.uniprot.org/uniprot/P12614 P12614]
+
−
** [http://www.uniprot.org/uniprot/P06835 P06835]
+
−
** [http://www.uniprot.org/uniprot/P26205 P26205]
+
−
** [http://www.uniprot.org/uniprot/P26204 P26204]
+
−
** [http://www.uniprot.org/uniprot/P07337 P07337]
+
−
** [http://www.uniprot.org/uniprot/Q8X8G6 Q8X8G6]
+
−
** [http://www.uniprot.org/uniprot/Q12653 Q12653]
+
−
** [http://www.uniprot.org/uniprot/P48825 P48825]
+
−
** [http://www.uniprot.org/uniprot/P94248 P94248]
+
−
** [http://www.uniprot.org/uniprot/O24749 O24749]
+
−
** [http://www.uniprot.org/uniprot/Q9SPK3 Q9SPK3]
+
−
** [http://www.uniprot.org/uniprot/P22073 P22073]
+
−
** [http://www.uniprot.org/uniprot/P22505 P22505]
+
−
** [http://www.uniprot.org/uniprot/P96316 P96316]
+
−
** [http://www.uniprot.org/uniprot/P10482 P10482]
+
−
** [http://www.uniprot.org/uniprot/P14002 P14002]
+
−
** [http://www.uniprot.org/uniprot/P15885 P15885]
+
−
** [http://www.uniprot.org/uniprot/P26208 P26208]
+
−
** [http://www.uniprot.org/uniprot/Q41172 Q41172]
+
−
** [http://www.uniprot.org/uniprot/Q7M0Q7 Q7M0Q7]
+
−
** [http://www.uniprot.org/uniprot/Q08638 Q08638]
+
−
** [http://www.uniprot.org/uniprot/Q9S9H4 Q9S9H4]
+
−
** [http://www.uniprot.org/uniprot/Q59976 Q59976]
+
−
** [http://www.uniprot.org/uniprot/Q59437 Q59437]
+
−
** [http://www.uniprot.org/uniprot/Q42618 Q42618]
+
−
** [http://www.uniprot.org/uniprot/Q42975 Q42975]
+
−
** [http://www.uniprot.org/uniprot/Q40984 Q40984]
+
−
** [http://www.uniprot.org/uniprot/Q43073 Q43073]
+
−
** [http://www.uniprot.org/uniprot/O82074 O82074]
+
−
** [http://www.uniprot.org/uniprot/O24524 O24524]
+
−
** [http://www.uniprot.org/uniprot/Q8CJM3 Q8CJM3]
+
−
** [http://www.uniprot.org/uniprot/Q9X9R4 Q9X9R4]
+
−
** [http://www.uniprot.org/uniprot/O68843 O68843]
+
−
** [http://www.uniprot.org/uniprot/O82772 O82772]
+
−
** [http://www.uniprot.org/uniprot/O49117 O49117]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=beta-glucosidase-like_chloroplastic}}
 
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
+
{{#set: ec number=EC-3.1.4.46}}
−
{{#set: common name=beta_glucosidase}}
+
{{#set: gene associated=Tiso_gene_17232|Tiso_gene_5334}}
−
{{#set: ec number=EC-3.2.1.21}}
+
−
{{#set: gene associated=Tiso_gene_2344|Tiso_gene_13305|Tiso_gene_10001|Tiso_gene_13306|Tiso_gene_2843|Tiso_gene_8669|Tiso_gene_6188|Tiso_gene_15066|Tiso_gene_6497|Tiso_gene_5836|Tiso_gene_6007|Tiso_gene_6187|Tiso_gene_3467|Tiso_gene_15067}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:48, 21 March 2018

Reaction RXN-14136

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 glycerophosphoserine[c] + 1 H2O[c] => 1 H+[c] + 1 sn-glycerol 3-phosphate[c] + 1 L-serine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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