Difference between revisions of "Tiso gene 9243"

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(Created page with "Category:Gene == Gene Tiso_gene_1365 == * left end position: ** 6843 * transcription direction: ** POSITIVE * right end position: ** 8852 * centisome position: ** 28.45795...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16910 RXN-16910] == * direction: ** LEFT-TO-RIGHT * common name: ** carbamoyl_phosphate_synthet...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_1365 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16910 RXN-16910] ==
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* left end position:
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* direction:
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** 6843
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** carbamoyl_phosphate_synthetase
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* right end position:
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** protein_pyr1-3
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** 8852
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* centisome position:
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** 28.457954   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ATPSYN-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-18238]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CARBAMATE]][c] '''+''' 2 [[PROTON]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 ammonium[c] '''+''' 1 carboxyphosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 carbamate[c] '''+''' 2 H+[c]
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***ec-number
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[PWY-7219]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_4976]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4975]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4685]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY-7693]], guadinomine B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7693 PWY-7693]
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** '''3''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6843}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=carbamoyl_phosphate_synthetase}}
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{{#set: right end position=8852}}
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{{#set: common name=protein_pyr1-3}}
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{{#set: centisome position=28.457954    }}
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{{#set: gene associated=Tiso_gene_4976|Tiso_gene_4975|Tiso_gene_4685}}
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{{#set: reaction associated=ATPSYN-RXN}}
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{{#set: in pathway=PWY-7693}}
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{{#set: pathway associated=PWY-7219}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:49, 21 March 2018

Reaction RXN-16910

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • carbamoyl_phosphate_synthetase
    • protein_pyr1-3
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ammonium[c] + 1 carboxyphosphate[c] => 1 phosphate[c] + 1 carbamate[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7693, guadinomine B biosynthesis: PWY-7693
    • 3 reactions found over 12 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9243&oldid=36592"