Difference between revisions of "CSm"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9518 RXN-9518] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyhexanoyl-[acyl-carri...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FERULOYL-COA FERULOYL-COA] == * smiles: ** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=C(OC)C(O)=CC...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9518 RXN-9518] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FERULOYL-COA FERULOYL-COA] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=C(OC)C(O)=CC=1))COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-]
 
* common name:
 
* common name:
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** 3-hydroxyhexanoyl-[acyl-carrier protein] reductase
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** feruloyl-CoA
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** polyketide_synthase
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* inchi key:
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** 3-oxoacyl-(acyl-carrier-protein)
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** InChIKey=GBXZVJQQDAJGSO-NBXNMEGSSA-J
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** 939.674   
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
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* Synonym(s):
 
* Synonym(s):
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** trans-feruloyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-1106]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-oxo-hexanoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxyhexanoyl-ACPs]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-hexanoyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxyhexanoyl-[acp][c]
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* [[6.2.1.34-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13083]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9885]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=3-hydroxyhexanoyl-[acyl-carrier protein] reductase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=44229137 44229137]
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{{#set: common name=polyketide_synthase}}
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* CHEBI:
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57276 57276]
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{{#set: ec number=EC-2.3.1.86}}
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* LIGAND-CPD:
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{{#set: ec number=EC-2.3.1.85}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00406 C00406]
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: smiles=CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=C(OC)C(O)=CC=1))COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-]}}
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{{#set: gene associated=Tiso_gene_13083|Tiso_gene_13394|Tiso_gene_500|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_9885|Tiso_gene_135}}
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{{#set: common name=feruloyl-CoA}}
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{{#set: in pathway=PWY-5971|PWY-5994}}
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{{#set: inchi key=InChIKey=GBXZVJQQDAJGSO-NBXNMEGSSA-J}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: molecular weight=939.674    }}
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{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: common name=trans-feruloyl-CoA}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: consumed by=RXN-1106}}
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{{#set: produced by=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN|6.2.1.34-RXN}}

Revision as of 15:51, 21 March 2018

Metabolite FERULOYL-COA

  • smiles:
    • CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=C(OC)C(O)=CC=1))COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-]
  • common name:
    • feruloyl-CoA
  • inchi key:
    • InChIKey=GBXZVJQQDAJGSO-NBXNMEGSSA-J
  • molecular weight:
    • 939.674
  • Synonym(s):
    • trans-feruloyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=C(OC)C(O)=CC=1))COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-" cannot be used as a page name in this wiki.




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