Difference between revisions of "Tiso gene 14920"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16137 RXN-16137] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15568 CPD-15568] == * smiles: ** CCCCCCCCCCCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16137 RXN-16137] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15568 CPD-15568] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** CCCCCCCCCCCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
 
* common name:
 
* common name:
** thiolase
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** 2-trans-tetradecenoyl-CoA
** acetyl-_c-acetyltransferase
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* inchi key:
** 3-ketoacyl-_thiolase
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** InChIKey=MBCVYCOKMMMWLX-YYMFEJJQSA-J
* ec number:
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* molecular weight:
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
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** 971.845   
 
* Synonym(s):
 
* Synonym(s):
 +
** (2E)-tetradecenoyl-CoA
 +
** trans-tetradec-2-enoyl-CoA
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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== Reaction(s) known to produce the compound ==
** 1 [[CPD-17388]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-17312]][c]
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* [[RXN-14131]]
* With common name(s):
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* [[ACOA140or]]
** 1 3-oxo-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 docosahexaenoyl-CoA[c]
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== Reaction(s) of unknown directionality ==
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17451]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15327]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3856]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10116]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
{{#set: common name=thiolase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C05273 C05273]
{{#set: common name=acetyl-_c-acetyltransferase}}
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* HMDB : HMDB03946
{{#set: common name=3-ketoacyl-_thiolase}}
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* CHEBI:
{{#set: ec number=EC-2.3.1.16}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=61405 61405]
{{#set: gene associated=Tiso_gene_17451|Tiso_gene_15327|Tiso_gene_3855|Tiso_gene_3856|Tiso_gene_10116}}
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* METABOLIGHTS : MTBLC61405
{{#set: in pathway=PWY-7606}}
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* PUBCHEM:
{{#set: reconstruction category=annotation}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46173185 46173185]
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: smiles=CCCCCCCCCCCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: common name=2-trans-tetradecenoyl-CoA}}
 +
{{#set: inchi key=InChIKey=MBCVYCOKMMMWLX-YYMFEJJQSA-J}}
 +
{{#set: molecular weight=971.845    }}
 +
{{#set: common name=(2E)-tetradecenoyl-CoA|trans-tetradec-2-enoyl-CoA}}
 +
{{#set: produced by=RXN-14131|ACOA140or}}

Revision as of 16:51, 21 March 2018

Metabolite CPD-15568

  • smiles:
    • CCCCCCCCCCCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
  • common name:
    • 2-trans-tetradecenoyl-CoA
  • inchi key:
    • InChIKey=MBCVYCOKMMMWLX-YYMFEJJQSA-J
  • molecular weight:
    • 971.845
  • Synonym(s):
    • (2E)-tetradecenoyl-CoA
    • trans-tetradec-2-enoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • LIGAND-CPD:
  • HMDB : HMDB03946
  • CHEBI:
  • METABOLIGHTS : MTBLC61405
  • PUBCHEM:
"CCCCCCCCCCCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O" cannot be used as a page name in this wiki.