Difference between revisions of "OROTPDECARB-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE SARCOSINE] == * smiles: ** C[N+]CC(=O)[O-] * inchi key: ** InChIKey=FSYKKLYZXJSNPZ-UH...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12893 RXN-12893] == * direction: ** LEFT-TO-RIGHT * common name: ** cyanate_hydratase * ec numb...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE SARCOSINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12893 RXN-12893] ==
* smiles:
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* direction:
** C[N+]CC(=O)[O-]
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** LEFT-TO-RIGHT
* inchi key:
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** InChIKey=FSYKKLYZXJSNPZ-UHFFFAOYSA-N
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* common name:
 
* common name:
** sarcosine
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** cyanate_hydratase
* molecular weight:
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* ec number:
** 89.094   
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** [http://enzyme.expasy.org/EC/4.2.1.104 EC-4.2.1.104]
 
* Synonym(s):
 
* Synonym(s):
** N-methylglycine
 
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[RXN66-577]]
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* With identifiers:
* [[SARCOSINE-DEHYDROGENASE-RXN]]
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** 3 [[PROTON]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[CPD-69]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 1 [[AMMONIUM]][c]
== Reaction(s) known to produce the compound ==
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* With common name(s):
* [[DIMETHYLGLYCINE-DEHYDROGENASE-RXN]]
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** 3 H+[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 cyanate[c] '''=>''' 2 CO2[c] '''+''' 1 ammonium[c]
* [[RXN66-576]]
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* [[CREATINASE-RXN]]
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== Genes associated with this reaction  ==
== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_15128]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* CAS : 107-97-1
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* LIGAND-RXN:
* METABOLIGHTS : MTBLC57433
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** [http://www.genome.jp/dbget-bin/www_bget?R07315 R07315]
* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7311726 7311726]
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{{#set: common name=cyanate_hydratase}}
* HMDB : HMDB00271
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{{#set: ec number=EC-4.2.1.104}}
* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_15128}}
** [http://www.genome.jp/dbget-bin/www_bget?C00213 C00213]
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{{#set: in pathway=}}
* CHEBI:
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{{#set: reconstruction category=annotation}}
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57433 57433]
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
* BIGG : sarcs
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{{#set: reconstruction tool=pathwaytools}}
{{#set: smiles=C[N+]CC(=O)[O-]}}
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{{#set: inchi key=InChIKey=FSYKKLYZXJSNPZ-UHFFFAOYSA-N}}
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{{#set: common name=sarcosine}}
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{{#set: molecular weight=89.094    }}
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{{#set: common name=N-methylglycine}}
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{{#set: consumed by=RXN66-577|SARCOSINE-DEHYDROGENASE-RXN}}
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{{#set: produced by=DIMETHYLGLYCINE-DEHYDROGENASE-RXN|RXN66-576|CREATINASE-RXN}}
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Revision as of 16:51, 21 March 2018

Reaction RXN-12893

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cyanate_hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 3 H+[c] + 1 hydrogencarbonate[c] + 1 cyanate[c] => 2 CO2[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links