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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-DEHYDRATASE-RXN 3-DEHYDROQUINATE-DEHYDRATASE-RXN] == | + | == Gene Tiso_gene_4415 == |
| − | * direction:
| + | |
| − | ** REVERSIBLE
| + | |
| − | * common name:
| + | |
| − | ** pentafunctional_protein
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/4.2.1.10 EC-4.2.1.10]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * Reaction: [[AGMATIN-RXN]] |
| − | ** 1 [[DEHYDROQUINATE]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[3-DEHYDRO-SHIKIMATE]][c]
| + | ** Source: [[orthology-esiliculosus]] |
| − | * With common name(s): | + | * Reaction: [[ARGINASE-RXN]] |
| − | ** 1 3-dehydroquinate[c] '''<=>''' 1 H2O[c] '''+''' 1 3-dehydroshikimate[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_5752]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_14718]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_8720]] | + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_5753]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_5619]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-6707]], gallate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6707 PWY-6707]
| + | |
| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
| + | |
| − | * [[PWY-6416]], quinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6416 PWY-6416]
| + | |
| − | ** '''2''' reactions found over '''3''' reactions in the full pathway
| + | |
| − | * [[QUINATEDEG-PWY]], quinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=QUINATEDEG-PWY QUINATEDEG-PWY]
| + | |
| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
| + | |
| − | * [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
| + | |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| | ** Source: [[orthology-athaliana]] | | ** Source: [[orthology-athaliana]] |
| − | *** Tool: [[pantograph]]
| |
| | ** Source: [[orthology-esiliculosus]] | | ** Source: [[orthology-esiliculosus]] |
| − | *** Tool: [[pantograph]] | + | * Reaction: [[GUANIDINOBUTYRASE-RXN]] |
| − | * Category: [[manual]] | + | ** Source: [[orthology-synechocystis]] |
| − | ** Source: [[manual-primary_network]] | + | == Pathways associated == |
| − | * Category: [[annotation]] | + | * [[ARGASEDEG-PWY]] |
| − | ** Source: [[annotation-in-silico_annotation]] | + | * [[PWY0-823]] |
| − | *** Tool: [[pathwaytools]] | + | * [[ARGDEG-IV-PWY]] |
| | + | * [[ARG-PRO-PWY]] |
| | + | * [[ARG-GLU-PWY]] |
| | + | * [[ARGDEG-V-PWY]] |
| | + | * [[PWY-4984]] |
| | + | * [[PWY-5742]] |
| | + | * [[PWY-7523]] |
| | + | * [[PWY-6305]] |
| | + | * [[PWY-6922]] |
| | + | * [[PWY-40]] |
| | + | * [[CITRULBIO-PWY]] |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: reaction associated=AGMATIN-RXN|ARGINASE-RXN|GUANIDINOBUTYRASE-RXN}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21096 21096]
| + | {{#set: pathway associated=ARGASEDEG-PWY|PWY0-823|ARGDEG-IV-PWY|ARG-PRO-PWY|ARG-GLU-PWY|ARGDEG-V-PWY|PWY-4984|PWY-5742|PWY-7523|PWY-6305|PWY-6922|PWY-40|CITRULBIO-PWY}} |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03084 R03084]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P05195 P05195]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P46380 P46380]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CF39 Q9CF39]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P07547 P07547]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P08566 P08566]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43878 P43878]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P05194 P05194]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q58849 Q58849]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A4Z6 P0A4Z6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PJ53 Q9PJ53]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P05147 P05147]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P24670 P24670]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P35146 P35146]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q42947 Q42947]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q48255 Q48255]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P73367 P73367]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O65917 O65917]
| + | |
| − | {{#set: direction=REVERSIBLE}} | + | |
| − | {{#set: common name=pentafunctional_protein}}
| + | |
| − | {{#set: ec number=EC-4.2.1.10}}
| + | |
| − | {{#set: gene associated=Tiso_gene_5752|Tiso_gene_14718|Tiso_gene_8720|Tiso_gene_5753|Tiso_gene_5619}}
| + | |
| − | {{#set: in pathway=PWY-6707|PWY-6416|QUINATEDEG-PWY|PWY-6163}} | + | |
| − | {{#set: reconstruction category=orthology|manual|annotation}}
| + | |
| − | {{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|manual-primary_network|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
