Difference between revisions of "Tiso gene 4415"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R524-RXN R524-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** cyanate_hydratase * ec number...")
(Created page with "Category:Gene == Gene Tiso_gene_3765 == * right end position: ** 13972 * transcription direction: ** POSITIVE * left end position: ** 11010 * centisome position: ** 68.491...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R524-RXN R524-RXN] ==
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== Gene Tiso_gene_3765 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 13972
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* common name:
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* transcription direction:
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** cyanate_hydratase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.2.1.104 EC-4.2.1.104]
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** 11010
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* centisome position:
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** 68.49145   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.4.24.71-RXN]]
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** 1 [[CPD-69]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CARBAMATE]][c]
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* With common name(s):
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** 1 cyanate[c] '''+''' 1 H+[c] '''+''' 1 hydrogencarbonate[c] '''=>''' 1 CO2[c] '''+''' 1 carbamate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15128]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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== Pathways  ==
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* [[CYANCAT-PWY]], cyanate degradation: [http://metacyc.org/META/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=13972}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18489 18489]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=11010}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03546 R03546]
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{{#set: centisome position=68.49145    }}
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* UNIPROT:
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{{#set: reaction associated=3.4.24.71-RXN}}
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** [http://www.uniprot.org/uniprot/P00816 P00816]
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** [http://www.uniprot.org/uniprot/Q55367 Q55367]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=cyanate_hydratase}}
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{{#set: ec number=EC-4.2.1.104}}
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{{#set: gene associated=Tiso_gene_15128}}
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{{#set: in pathway=CYANCAT-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:53, 21 March 2018

Gene Tiso_gene_3765

  • right end position:
    • 13972
  • transcription direction:
    • POSITIVE
  • left end position:
    • 11010
  • centisome position:
    • 68.49145
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4415&oldid=37042"