Difference between revisions of "CPD-576"

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(Created page with "Category:Gene == Gene Tiso_gene_12997 == * left end position: ** 9062 * transcription direction: ** NEGATIVE * right end position: ** 11370 * centisome position: ** 78.296...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17113 RXN-17113] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase * e...")
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_12997 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17113 RXN-17113] ==
* left end position:
+
* direction:
** 9062
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** NEGATIVE
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** acyl-coenzyme_a_oxidase
* right end position:
+
* ec number:
** 11370
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
* centisome position:
+
** 78.29618   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[ARGININE--TRNA-LIGASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-18491]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-18492]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 oxygen[c] '''+''' 1 (6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 (2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA[c]
***ec-number
+
 
** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
* [[TRNA-CHARGING-PWY]]
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* Gene: [[Tiso_gene_18566]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=9062}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
{{#set: right end position=11370}}
+
{{#set: ec number=EC-1.3.3.6}}
{{#set: centisome position=78.29618    }}
+
{{#set: gene associated=Tiso_gene_18566}}
{{#set: reaction associated=ARGININE--TRNA-LIGASE-RXN}}
+
{{#set: in pathway=PWY-7726}}
{{#set: pathway associated=TRNA-CHARGING-PWY}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:53, 21 March 2018

Reaction RXN-17113

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oxygen[c] + 1 (6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] => 1 hydrogen peroxide[c] + 1 (2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links