Difference between revisions of "RXN-15007"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15045 RXN-15045] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7663 RXN-7663] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyll_chloroplastic * e...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7663 RXN-7663] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** chlorophyll_chloroplastic | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.5.1.62 EC-2.5.1.62] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-7005]][c] '''+''' 1 [[PPI]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 chlorophyllide a[c] '''+''' 1 H+[c] '''+''' 1 geranylgeranyl diphosphate[c] '''=>''' 1 geranylgeranyl chlorophyll a[c] '''+''' 1 diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_19542]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-creinhardtii]] | ||
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064] |
** '''5''' reactions found over '''5''' reactions in the full pathway | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-creinhardtii]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[manual]] | ||
| + | ** Source: [[manual-primary_network]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| − | |||
| − | |||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: ec number=EC-2. | + | {{#set: common name=chlorophyll_chloroplastic}} |
| − | {{#set: in pathway=PWY- | + | {{#set: ec number=EC-2.5.1.62}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: gene associated=Tiso_gene_19542}} |
| − | {{#set: reconstruction source= | + | {{#set: in pathway=PWY-5064}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction category=orthology|manual|annotation}} |
| + | {{#set: reconstruction source=orthology-creinhardtii|manual-primary_network|annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 15:54, 21 March 2018
Contents
Reaction RXN-7663
- direction:
- LEFT-TO-RIGHT
- common name:
- chlorophyll_chloroplastic
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CHLOROPHYLLIDE-A[c] + 1 PROTON[c] + 1 GERANYLGERANYL-PP[c] => 1 CPD-7005[c] + 1 PPI[c]
- With common name(s):
- 1 chlorophyllide a[c] + 1 H+[c] + 1 geranylgeranyl diphosphate[c] => 1 geranylgeranyl chlorophyll a[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_19542
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-creinhardtii
- Source: annotation-in-silico_annotation
Pathways
- PWY-5064, chlorophyll a biosynthesis II: PWY-5064
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-creinhardtii
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
