Difference between revisions of "RETINAL"

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(Created page with "Category:Gene == Gene Tiso_gene_1586 == * left end position: ** 7270 * transcription direction: ** POSITIVE * right end position: ** 8637 * centisome position: ** 31.55108...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-ASPARTATE-OXID-RXN L-ASPARTATE-OXID-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http:/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_1586 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-ASPARTATE-OXID-RXN L-ASPARTATE-OXID-RXN] ==
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* left end position:
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* direction:
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** 7270
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/1.4.3.16 EC-1.4.3.16]
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* right end position:
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** 8637
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* centisome position:
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** 31.55108   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-15556]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[IMINOASPARTATE]][c]
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***ec-number
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* With common name(s):
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** 1 oxygen[c] '''+''' 1 L-aspartate[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 H+[c] '''+''' 1 2-iminosuccinate[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7511]]
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* Gene: [[Tiso_gene_7285]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-5316]], nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5316 PWY-5316]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7342]], superpathway of nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7342 PWY-7342]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=7270}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25876 25876]
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{{#set: right end position=8637}}
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* LIGAND-RXN:
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{{#set: centisome position=31.55108    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00481 R00481]
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00357 R00357]
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{{#set: pathway associated=PWY-7511}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.4.3.16}}
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{{#set: gene associated=Tiso_gene_7285}}
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{{#set: in pathway=PWY-5316|PWY-7342|PYRIDNUCSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 16:59, 21 March 2018

Reaction L-ASPARTATE-OXID-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5316, nicotine biosynthesis: PWY-5316
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-7342, superpathway of nicotine biosynthesis: PWY-7342
    • 3 reactions found over 13 reactions in the full pathway
  • PYRIDNUCSYN-PWY, NAD biosynthesis I (from aspartate): PYRIDNUCSYN-PWY
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RETINAL&oldid=37882"