Difference between revisions of "RXN-10815"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4261 RXN0-4261] == * direction: ** LEFT-TO-RIGHT * common name: ** atp-dependent_dna_helicase...")
(Created page with "Category:Gene == Gene Tiso_gene_829 == * right end position: ** 27885 * transcription direction: ** POSITIVE * left end position: ** 21934 * centisome position: ** 76.7916...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4261 RXN0-4261] ==
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== Gene Tiso_gene_829 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 27885
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* common name:
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* transcription direction:
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** atp-dependent_dna_helicase
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** POSITIVE
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** helicase
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* left end position:
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** rep_helicase
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** 21934
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* centisome position:
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** 76.79166   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[5.99.1.3-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[Supercoiled-Duplex-DNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Single-Stranded-DNAs]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 ATP[c] '''+''' 1 a supercoiled duplex DNA[c] '''+''' 1 H2O[c] '''=>''' 1 a single stranded DNA[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[ATPASE-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_7553]]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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* [[Tiso_gene_7552]]
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* Reaction: [[RXN-12195]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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* [[Tiso_gene_5713]]
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* Reaction: [[RXN-12196]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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* [[Tiso_gene_395]]
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* Reaction: [[RXN0-5462]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14420]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9320]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14019]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_13200]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14419]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14204]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_3462]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=27885}}
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{{#set: common name=atp-dependent_dna_helicase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=helicase}}
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{{#set: left end position=21934}}
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{{#set: common name=rep_helicase}}
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{{#set: centisome position=76.79166    }}
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{{#set: gene associated=Tiso_gene_7553|Tiso_gene_7552|Tiso_gene_5713|Tiso_gene_395|Tiso_gene_14420|Tiso_gene_9320|Tiso_gene_14019|Tiso_gene_13200|Tiso_gene_14419|Tiso_gene_14204|Tiso_gene_3462}}
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{{#set: reaction associated=5.99.1.3-RXN|ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: in pathway=}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 16:59, 21 March 2018

Gene Tiso_gene_829

  • right end position:
    • 27885
  • transcription direction:
    • POSITIVE
  • left end position:
    • 21934
  • centisome position:
    • 76.79166
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10815&oldid=37919"