Difference between revisions of "Cytosine-34-tRNA-Precursors"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NICONUCADENYLYLTRAN-RXN NICONUCADENYLYLTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12583 RXN-12583] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate:thiamin diphosphat...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NICONUCADENYLYLTRAN-RXN NICONUCADENYLYLTRAN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12583 RXN-12583] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Probable nicotinate-nucleotide adenylyltransferase
+
** pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
−
* ec number:
+
** pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial
−
** [http://enzyme.expasy.org/EC/2.7.7.18 EC-2.7.7.18]
+
** dihydrolipoamide_acetyltransferase
 +
** ORF
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[2-ALPHA-HYDROXYETHYL-THPP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 ATP[c] '''=>''' 1 nicotinate adenine dinucleotide[c] '''+''' 1 diphosphate[c]
+
** 1 H+[c] '''+''' 1 thiamine diphosphate[c] '''+''' 1 pyruvate[c] '''=>''' 1 CO2[c] '''+''' 1 2-(α-hydroxyethyl)thiamine diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6231]]
+
* Gene: [[Tiso_gene_7519]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17539]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6983]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_11362]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_2515]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_2693]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
 
−
** '''3''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7761]], NAD salvage pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7761 PWY-7761]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22860 22860]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03005 R03005]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00014 R00014]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Probable nicotinate-nucleotide adenylyltransferase}}
+
{{#set: common name=pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)}}
−
{{#set: ec number=EC-2.7.7.18}}
+
{{#set: common name=pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial}}
−
{{#set: gene associated=Tiso_gene_6231}}
+
{{#set: common name=dihydrolipoamide_acetyltransferase}}
−
{{#set: in pathway=PYRIDNUCSAL-PWY|PWY-5381|PYRIDNUCSYN-PWY|PWY-7761|PWY-5653}}
+
{{#set: common name=ORF}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: gene associated=Tiso_gene_7519|Tiso_gene_17539|Tiso_gene_6983|Tiso_gene_11362|Tiso_gene_2515|Tiso_gene_2693}}
−
{{#set: reconstruction source=annotation-experimental_annotation}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:01, 21 March 2018

Reaction RXN-12583

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
    • pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial
    • dihydrolipoamide_acetyltransferase
    • ORF
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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