Difference between revisions of "Tiso gene 4246"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-REDUCT-RXN 3-OXOACYL-ACP-REDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Gene == Gene Tiso_gene_19431 == * right end position: ** 2327 * transcription direction: ** POSITIVE * left end position: ** 119 * centisome position: ** 5.109489...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-REDUCT-RXN 3-OXOACYL-ACP-REDUCT-RXN] ==
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== Gene Tiso_gene_19431 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2327
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* common name:
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* transcription direction:
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** polyketide_synthase
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** POSITIVE
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** 3-oxoacyl-(acyl-carrier-protein)
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* left end position:
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* ec number:
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** 119
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** 5.109489   
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[B-KETOACYL-ACP]][c] '''=>''' 1 [[OH-ACYL-ACP]][c] '''+''' 1 [[NADP]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxoacyl-[acp][c] '''=>''' 1 a (3R)-3-hydroxyacyl-[acyl-carrier protein][c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13083]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9885]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated: [http://metacyc.org/META/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=2327}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02767 R02767]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: left end position=119}}
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** [http://www.uniprot.org/uniprot/P49327 P49327]
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{{#set: centisome position=5.109489    }}
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** [http://www.uniprot.org/uniprot/O25286 O25286]
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P51831 P51831]
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** [http://www.uniprot.org/uniprot/Q9PI70 Q9PI70]
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** [http://www.uniprot.org/uniprot/P0AEK2 P0AEK2]
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** [http://www.uniprot.org/uniprot/Q9ZLS0 Q9ZLS0]
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** [http://www.uniprot.org/uniprot/P43713 P43713]
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** [http://www.uniprot.org/uniprot/P14802 P14802]
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** [http://www.uniprot.org/uniprot/O32229 O32229]
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** [http://www.uniprot.org/uniprot/Q9JW61 Q9JW61]
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** [http://www.uniprot.org/uniprot/O34782 O34782]
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** [http://www.uniprot.org/uniprot/O67610 O67610]
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** [http://www.uniprot.org/uniprot/P27583 P27583]
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** [http://www.uniprot.org/uniprot/P33207 P33207]
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** [http://www.uniprot.org/uniprot/P27582 P27582]
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** [http://www.uniprot.org/uniprot/P28643 P28643]
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** [http://www.uniprot.org/uniprot/P73574 P73574]
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** [http://www.uniprot.org/uniprot/O54438 O54438]
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** [http://www.uniprot.org/uniprot/P55336 P55336]
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** [http://www.uniprot.org/uniprot/Q9RA33 Q9RA33]
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** [http://www.uniprot.org/uniprot/Q44326 Q44326]
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** [http://www.uniprot.org/uniprot/P12276 P12276]
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** [http://www.uniprot.org/uniprot/P12785 P12785]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=polyketide_synthase}}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: gene associated=Tiso_gene_13394|Tiso_gene_500|Tiso_gene_136|Tiso_gene_13083|Tiso_gene_135|Tiso_gene_9885|Tiso_gene_10876}}
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{{#set: in pathway=FASYN-ELONG-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:01, 21 March 2018

Gene Tiso_gene_19431

  • right end position:
    • 2327
  • transcription direction:
    • POSITIVE
  • left end position:
    • 119
  • centisome position:
    • 5.109489
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4246&oldid=38180"