Difference between revisions of "Tiso gene 17170"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.40 EC-1.1.1.40]
+
** [http://enzyme.expasy.org/EC/6.2.1.4 EC-6.2.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADP]][c] '''+''' 1 [[MAL]][c] '''=>''' 1 [[NADPH]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[ITACONATE]][c] '''=>''' 1 [[CPD-1137]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADP+[c] '''+''' 1 (S)-malate[c] '''=>''' 1 NADPH[c] '''+''' 1 pyruvate[c] '''+''' 1 CO2[c]
+
** 1 coenzyme A[c] '''+''' 1 GTP[c] '''+''' 1 itaconate[c] '''=>''' 1 itaconyl-CoA[c] '''+''' 1 GDP[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6675]]
+
* Gene: [[Tiso_gene_11866]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_12896]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12200]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
+
* [[PWY-5749]], itaconate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5749 PWY-5749]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
+
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
+
−
** '''7''' reactions found over '''10''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18253 18253]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00216 R00216]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02405 R02405]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P12628 P12628]
+
−
** [http://www.uniprot.org/uniprot/P06801 P06801]
+
−
** [http://www.uniprot.org/uniprot/P13697 P13697]
+
−
** [http://www.uniprot.org/uniprot/P16243 P16243]
+
−
** [http://www.uniprot.org/uniprot/O48656 O48656]
+
−
** [http://www.uniprot.org/uniprot/P22178 P22178]
+
−
** [http://www.uniprot.org/uniprot/P93139 P93139]
+
−
** [http://www.uniprot.org/uniprot/P34105 P34105]
+
−
** [http://www.uniprot.org/uniprot/P28227 P28227]
+
−
** [http://www.uniprot.org/uniprot/P36444 P36444]
+
−
** [http://www.uniprot.org/uniprot/P40927 P40927]
+
−
** [http://www.uniprot.org/uniprot/P37223 P37223]
+
−
** [http://www.uniprot.org/uniprot/P48163 P48163]
+
−
** [http://www.uniprot.org/uniprot/Q16798 Q16798]
+
−
** [http://www.uniprot.org/uniprot/O50015 O50015]
+
−
** [http://www.uniprot.org/uniprot/O04935 O04935]
+
−
** [http://www.uniprot.org/uniprot/O04936 O04936]
+
−
** [http://www.uniprot.org/uniprot/P37222 P37222]
+
−
** [http://www.uniprot.org/uniprot/Q42888 Q42888]
+
−
** [http://www.uniprot.org/uniprot/Q42889 Q42889]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.1.1.40}}
+
{{#set: ec number=EC-6.2.1.4}}
−
{{#set: gene associated=Tiso_gene_6675|Tiso_gene_12896|Tiso_gene_12200}}
+
{{#set: gene associated=Tiso_gene_11866}}
−
{{#set: in pathway=PWY-241|GLUCONEO-PWY|PWY-7117}}
+
{{#set: in pathway=PWY-5749}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-athaliana|orthology-synechocystis|orthology-esiliculosus}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Revision as of 16:03, 21 March 2018

Reaction RXN-8988

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 GTP[c] + 1 itaconate[c] => 1 itaconyl-CoA[c] + 1 GDP[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5749, itaconate degradation: PWY-5749
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17170&oldid=38420"