Difference between revisions of "CPD-676"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17846 RXN-17846] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** leucyl_phenylalanyl-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-474 RXN66-474] == * direction: ** LEFT-TO-RIGHT * common name: ** straight chain (R)-2-hydrox...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17846 RXN-17846] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-474 RXN66-474] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** ORF
+
** straight chain (R)-2-hydroxy fatty acyl-CoA ligase
** leucyl_phenylalanyl-trna--protein_transferase
+
** leucyl_phenylalanyl-trna--protein
+
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.3.2.6 EC-2.3.2.6]
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** [http://enzyme.expasy.org/EC/6.2.1 EC-6.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[Protein-N-terminal-L-Arginine]][c] '''+''' 1 [[Charged-LEU-tRNAs]][c] '''=>''' 1 [[LEU-tRNAs]][c] '''+''' 1 [[L-leucyl-L-arginyl-Protein]][c] '''+''' 1 [[PROTON]][c]
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[R2OH-Straight-Chain-234-Sat-FA]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[R2-2OH-Straight-Chain-234-Sat-FA-CoA]][c]
 
* With common name(s):
 
* With common name(s):
** 1 an N-terminal arginyl-[protein][c] '''+''' 1 an L-leucyl-[tRNAleu][c] '''=>''' 1 a tRNAleu[c] '''+''' 1 a [protein] N-terminal L-leucyl-L-arginine[c] '''+''' 1 H+[c]
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 a (2R)-2-hydroxy even numbered straight chain 2,3,4-saturated fatty acid[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 a (R)-2-hydroxy even numbered straight chain 2,3,4-saturated fatty acyl CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_8540]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_13698]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_2584]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7801]], N-end rule pathway I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7801 PWY-7801]
+
* [[PWY66-388]], fatty acid α-oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-388 PWY66-388]
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=ORF}}
+
{{#set: common name=straight chain (R)-2-hydroxy fatty acyl-CoA ligase}}
{{#set: common name=leucyl_phenylalanyl-trna--protein_transferase}}
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{{#set: ec number=EC-6.2.1}}
{{#set: common name=leucyl_phenylalanyl-trna--protein}}
+
{{#set: in pathway=PWY66-388}}
{{#set: ec number=EC-2.3.2.6}}
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{{#set: gene associated=Tiso_gene_8540|Tiso_gene_13698|Tiso_gene_2584}}
+
{{#set: in pathway=PWY-7801}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 17:04, 21 March 2018

Reaction RXN66-474

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • straight chain (R)-2-hydroxy fatty acyl-CoA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY66-388, fatty acid α-oxidation III: PWY66-388
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links