Difference between revisions of "PURINE-NUCLEOSIDASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_18322 == * left end position: ** 88 * transcription direction: ** POSITIVE * right end position: ** 2140 * centisome position: ** 2.8432956...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DXPREDISOM-RXN DXPREDISOM-RXN] == * direction: ** REVERSIBLE * common name: ** 1-deoxy-d-xylulose_5...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_18322 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DXPREDISOM-RXN DXPREDISOM-RXN] ==
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* left end position:
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* direction:
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** 88
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** 1-deoxy-d-xylulose_5-phosphate_reductoisomerase
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* right end position:
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* ec number:
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** 2140
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** [http://enzyme.expasy.org/EC/1.1.1.267 EC-1.1.1.267]
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* centisome position:
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** 2.8432956   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ADDALT-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DEOXYXYLULOSE-5P]][c]
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***ec-number
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* With common name(s):
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* [[ADENODEAMIN-RXN]]
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** 1 2-C-methyl-D-erythritol 4-phosphate[c] '''+''' 1 NADP+[c] '''<=>''' 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 1-deoxy-D-xylulose 5-phosphate[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7179]]
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* Gene: [[Tiso_gene_15169]]
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* [[SALVADEHYPOX-PWY]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY0-1296]]
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*** Assignment: EC-NUMBER
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* [[PWY-7179-1]]
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-6609]]
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*** Assignment: EC-NUMBER
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* [[PWY-6611]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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== Pathways ==
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=88}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13717 13717]
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{{#set: right end position=2140}}
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* LIGAND-RXN:
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{{#set: centisome position=2.8432956    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05688 R05688]
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{{#set: reaction associated=ADDALT-RXN|ADENODEAMIN-RXN}}
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{{#set: direction=REVERSIBLE}}
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{{#set: pathway associated=PWY-7179|SALVADEHYPOX-PWY|PWY0-1296|PWY-7179-1|PWY-6609|PWY-6611}}
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{{#set: common name=1-deoxy-d-xylulose_5-phosphate_reductoisomerase}}
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{{#set: ec number=EC-1.1.1.267}}
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{{#set: gene associated=Tiso_gene_15169}}
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{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:04, 21 March 2018

Reaction DXPREDISOM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 1-deoxy-d-xylulose_5-phosphate_reductoisomerase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7560, methylerythritol phosphate pathway II: PWY-7560
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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