Difference between revisions of "RXN0-5330"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMPCYCLOHYDROLASE-RXN IMPCYCLOHYDROLASE-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9871 CPD-9871] == * smiles: ** CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CC...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMPCYCLOHYDROLASE-RXN IMPCYCLOHYDROLASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9871 CPD-9871] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCC1(=C(C(OC)=CC(=C1C)O)O))C)C)C)C)C)C)C)C)C)C
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/3.5.4.10 EC-3.5.4.10]
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** 6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol
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* inchi key:
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** InChIKey=XCOXSBLQZPFVGK-RGIWONJESA-N
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* molecular weight:
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** 835.347   
 
* Synonym(s):
 
* Synonym(s):
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** 6-methoxy-3-methyl-2-decaprenyl-1,4-benzoquinol
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** 6-methoxy-5-methyl-2-decaprenyl-1,4-benzoquinol
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[IMP]][c] '''<=>''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c]
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* [[RXN-9235]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 IMP[c] '''<=>''' 1 5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18420]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18445 18445]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=50986092 50986092]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R01127 R01127]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=64181 64181]
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* UNIPROT:
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{{#set: smiles=CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCC1(=C(C(OC)=CC(=C1C)O)O))C)C)C)C)C)C)C)C)C)C}}
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** [http://www.uniprot.org/uniprot/P43852 P43852]
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{{#set: common name=6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol}}
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** [http://www.uniprot.org/uniprot/P12048 P12048]
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{{#set: inchi key=InChIKey=XCOXSBLQZPFVGK-RGIWONJESA-N}}
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** [http://www.uniprot.org/uniprot/P31335 P31335]
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{{#set: molecular weight=835.347    }}
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** [http://www.uniprot.org/uniprot/P26978 P26978]
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{{#set: common name=6-methoxy-3-methyl-2-decaprenyl-1,4-benzoquinol|6-methoxy-5-methyl-2-decaprenyl-1,4-benzoquinol}}
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** [http://www.uniprot.org/uniprot/P15639 P15639]
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{{#set: produced by=RXN-9235}}
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** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2]
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** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8]
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** [http://www.uniprot.org/uniprot/P31939 P31939]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-3.5.4.10}}
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{{#set: gene associated=Tiso_gene_18420}}
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{{#set: in pathway=PWY-6123|PWY-6124|PWY-7234}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 17:04, 21 March 2018

Metabolite CPD-9871

  • smiles:
    • CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCC1(=C(C(OC)=CC(=C1C)O)O))C)C)C)C)C)C)C)C)C)C
  • common name:
    • 6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol
  • inchi key:
    • InChIKey=XCOXSBLQZPFVGK-RGIWONJESA-N
  • molecular weight:
    • 835.347
  • Synonym(s):
    • 6-methoxy-3-methyl-2-decaprenyl-1,4-benzoquinol
    • 6-methoxy-5-methyl-2-decaprenyl-1,4-benzoquinol

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links




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