Difference between revisions of "Tiso gene 9916"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOBISALDOL-RXN SEDOBISALDOL-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.exp...")
(Created page with "Category:Gene == Gene Tiso_gene_5022 == * right end position: ** 4811 * transcription direction: ** NEGATIVE * left end position: ** 718 * centisome position: ** 3.7029397...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOBISALDOL-RXN SEDOBISALDOL-RXN] ==
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== Gene Tiso_gene_5022 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 4811
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.1.2 EC-4.1.2]
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** NEGATIVE
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* left end position:
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** 718
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* centisome position:
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** 3.7029397   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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** 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''<=>''' 1 [[D-SEDOHEPTULOSE-1-7-P2]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 D-erythrose 4-phosphate[c] '''+''' 1 glycerone phosphate[c] '''<=>''' 1 D-sedoheptulose-1,7-bisphosphate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9179]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_12272]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_14568]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_65]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways ==
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* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY0-1517]], sedoheptulose bisphosphate bypass: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1517 PWY0-1517]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=4811}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30167 30167]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=718}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01829 R01829]
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{{#set: centisome position=3.7029397    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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{{#set: ec number=EC-4.1.2}}
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{{#set: gene associated=Tiso_gene_9179|Tiso_gene_12272|Tiso_gene_14568|Tiso_gene_65}}
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{{#set: in pathway=CALVIN-PWY|PWY0-1517}}
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{{#set: reconstruction category=orthology|manual}}
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{{#set: reconstruction source=manual-primary_network|orthology-athaliana|orthology-creinhardtii|orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 16:05, 21 March 2018

Gene Tiso_gene_5022

  • right end position:
    • 4811
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 718
  • centisome position:
    • 3.7029397
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9916&oldid=38652"