Difference between revisions of "RXN1F-147"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASNSYNA-RXN ASNSYNA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** asparagine_synthetase *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7682 RXN-7682] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASNSYNA-RXN ASNSYNA-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7682 RXN-7682] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** asparagine_synthetase
 
−
** asparagine_synthetase_domaincontaining_protein_putat
 
−
** aspartate-ammonia_ligase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.1.1 EC-6.3.1.1]
+
** [http://enzyme.expasy.org/EC/1.17.1.4 EC-1.17.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[ASN]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[HYPOXANTHINE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[XANTHINE]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 ammonium[c] '''+''' 1 L-aspartate[c] '''=>''' 1 diphosphate[c] '''+''' 1 L-asparagine[c] '''+''' 1 AMP[c] '''+''' 1 H+[c]
+
** 1 H2O[c] '''+''' 1 hypoxanthine[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 xanthine[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2973]]
+
* Gene: [[Tiso_gene_11775]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_7495]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_1462]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[ASPARAGINESYN-PWY]], L-asparagine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINESYN-PWY ASPARAGINESYN-PWY]
+
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[orthology-athaliana]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11372 11372]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24670 24670]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00483 R00483]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01768 R01768]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P00963 P00963]
+
−
** [http://www.uniprot.org/uniprot/P08243 P08243]
+
−
** [http://www.uniprot.org/uniprot/P44338 P44338]
+
−
** [http://www.uniprot.org/uniprot/P49088 P49088]
+
−
** [http://www.uniprot.org/uniprot/P54264 P54264]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=asparagine_synthetase}}
+
{{#set: ec number=EC-1.17.1.4}}
−
{{#set: common name=asparagine_synthetase_domaincontaining_protein_putat}}
+
{{#set: gene associated=Tiso_gene_11775}}
−
{{#set: common name=aspartate-ammonia_ligase}}
+
{{#set: in pathway=P164-PWY|PWY-6596|SALVADEHYPOX-PWY}}
−
{{#set: ec number=EC-6.3.1.1}}
+
−
{{#set: gene associated=Tiso_gene_2973|Tiso_gene_7495|Tiso_gene_1462}}
+
−
{{#set: in pathway=ASPARAGINESYN-PWY}}
+
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:05, 21 March 2018

Reaction RXN-7682

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 hypoxanthine[c] + 1 NAD+[c] => 1 H+[c] + 1 xanthine[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
    • 4 reactions found over 17 reactions in the full pathway
  • PWY-6596, adenosine nucleotides degradation I: PWY-6596
    • 8 reactions found over 8 reactions in the full pathway
  • SALVADEHYPOX-PWY, adenosine nucleotides degradation II: SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN1F-147&oldid=38661"