Difference between revisions of "Tiso gene 18041"

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(Created page with "Category:Gene == Gene Tiso_gene_12875 == * left end position: ** 73 * transcription direction: ** POSITIVE * right end position: ** 3590 * centisome position: ** 1.0952739...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-884 RXN0-884] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http://e...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_12875 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-884 RXN0-884] ==
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* left end position:
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* direction:
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** 73
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ORF
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* right end position:
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* ec number:
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** 3590
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** [http://enzyme.expasy.org/EC/1.17.7.4 EC-1.17.7.4]
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* centisome position:
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** 1.0952739   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.4.21.4-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''=>''' 1 [[CPD-4211]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
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***automated-name-match
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* With common name(s):
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* [[RXN-17832]]
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** 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] '''=>''' 1 dimethylallyl diphosphate[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 H2O[c]
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** in-silico_annotation
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***automated-name-match
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7797]]
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* Gene: [[Tiso_gene_5609]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=73}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08210 R08210]
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{{#set: right end position=3590}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07219 R07219]
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{{#set: centisome position=1.0952739    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=3.4.21.4-RXN|RXN-17832}}
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{{#set: common name=ORF}}
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{{#set: pathway associated=PWY-7797}}
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{{#set: ec number=EC-1.17.7.4}}
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{{#set: gene associated=Tiso_gene_5609}}
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{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:06, 21 March 2018

Reaction RXN0-884

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7560, methylerythritol phosphate pathway II: PWY-7560
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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