Difference between revisions of "RXN-8028"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-384 RXN1G-384] == * direction: ** LEFT-TO-RIGHT * common name: ** cis,cis-delta7,25-3-oxo-C44...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-478 RXN66-478] == * direction: ** LEFT-TO-RIGHT * common name: ** phytol dehydrogenase ** pol...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-384 RXN1G-384] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-478 RXN66-478] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** cis,cis-delta7,25-3-oxo-C44:2-[acyl-carrier protein] reductase
+
** phytol dehydrogenase
 +
** polyketide_synthase
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.M9 EC-1.1.1.M9]
+
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[cis-cis-D7-25-3-oxo-C44-2-ACPs]][c] '''=>''' 1 [[cis-cis-D7-25-3-hydroxyC44-2-ACPs]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[PHYTOL]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-14926]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a cis,cis-delta7,25-3-oxo-C44:2-[acp][c] '''=>''' 1 a cis,cis-delta7,25-3-hydroxyC44:2-[acp][c] '''+''' 1 NADP+[c]
+
** 1 NAD+[c] '''+''' 1 phytol[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 phytenal[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13083]]
+
* Gene: [[Tiso_gene_7649]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6563]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6562]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5425]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5424]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
* [[PWY66-389]], phytol degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-389 PWY66-389]
−
** '''86''' reactions found over '''182''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=cis,cis-delta7,25-3-oxo-C44:2-[acyl-carrier protein] reductase}}
+
{{#set: common name=phytol dehydrogenase}}
−
{{#set: ec number=EC-1.1.1.M9}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: gene associated=Tiso_gene_13083}}
+
{{#set: common name=ORF}}
−
{{#set: in pathway=PWYG-321}}
+
{{#set: ec number=EC-1.1.1.1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_7649|Tiso_gene_6563|Tiso_gene_6562|Tiso_gene_5425|Tiso_gene_5424}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
{{#set: in pathway=PWY66-389}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:06, 21 March 2018

Reaction RXN66-478

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phytol dehydrogenase
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 phytol[c] => 1 NADH[c] + 1 H+[c] + 1 phytenal[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-389, phytol degradation: PWY66-389
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8028&oldid=38852"