Difference between revisions of "Tiso gene 18936"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17729 RXN-17729] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-acylglycerol-3-phosphate_...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ADP reductase ** ri...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17729 RXN-17729] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 1-acylglycerol-3-phosphate_o-acyltransferase
+
** ADP reductase
 +
** ribonucleoside-diphosphate_reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.51 EC-2.3.1.51]
+
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[1-Alkyl-glycerol-3-phosphate]][c] '''+''' 1 [[Long-Chain-Acyl-CoAs]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[1-Alkyl-2-acyl-glycerol-3-phosphate]][c]
+
** 1 [[ADP]][c] '''+''' 1 [[Red-Thioredoxin]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[DADP]][c] '''+''' 1 [[Ox-Thioredoxin]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 1-alkyl-sn-glycerol 3-phosphate[c] '''+''' 1 a long-chain acyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 a 2-acyl-1-alkyl-sn-glycerol 3-phosphate[c]
+
** 1 ADP[c] '''+''' 1 a reduced thioredoxin[c] '''=>''' 1 H2O[c] '''+''' 1 dADP[c] '''+''' 1 an oxidized thioredoxin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13959]]
+
* Gene: [[Tiso_gene_9916]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10617]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10138]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9915]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
+
* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
−
** '''7''' reactions found over '''16''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28034 28034]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02017 R02017]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=1-acylglycerol-3-phosphate_o-acyltransferase}}
+
{{#set: common name=ADP reductase}}
−
{{#set: ec number=EC-2.3.1.51}}
+
{{#set: common name=ribonucleoside-diphosphate_reductase}}
−
{{#set: gene associated=Tiso_gene_13959}}
+
{{#set: ec number=EC-1.17.4.1}}
−
{{#set: in pathway=PWY-7782}}
+
{{#set: gene associated=Tiso_gene_9916|Tiso_gene_10617|Tiso_gene_10138|Tiso_gene_9915}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: in pathway=PWY-7220|PWY-7227}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:07, 21 March 2018

Reaction ADPREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ADP reductase
    • ribonucleoside-diphosphate_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ADP[c] + 1 a reduced thioredoxin[c] => 1 H2O[c] + 1 dADP[c] + 1 an oxidized thioredoxin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7220, adenosine deoxyribonucleotides de novo biosynthesis II: PWY-7220
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7227, adenosine deoxyribonucleotides de novo biosynthesis: PWY-7227
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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