Difference between revisions of "TransportSeed FE+3"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NTDP NTDP] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside-triphosphate diphosphatase...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7674 RXN-7674] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyll_chloroplastic * e...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7674 RXN-7674] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** chlorophyll_chloroplastic |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.5.1.62 EC-2.5.1.62] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 | + | ** 1 [[CPD-7014]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CHLOROPHYLL-B]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 chlorophyllide b[c] '''+''' 1 phytyl diphosphate[c] '''+''' 2 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 chlorophyll b[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_19542]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-creinhardtii]] | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068] | ||
| + | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
** Source: [[orthology-creinhardtii]] | ** Source: [[orthology-creinhardtii]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R09067 R09067] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=chlorophyll_chloroplastic}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-2.5.1.62}} |
| − | {{#set: in pathway=}} | + | {{#set: gene associated=Tiso_gene_19542}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: in pathway=PWY-5068}} |
| − | {{#set: reconstruction source=orthology-creinhardtii}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii}} |
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 16:07, 21 March 2018
Contents
Reaction RXN-7674
- direction:
- LEFT-TO-RIGHT
- common name:
- chlorophyll_chloroplastic
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-7014[c] + 1 PHYTYL-PYROPHOSPHATE[c] + 2 PROTON[c] => 1 PPI[c] + 1 CHLOROPHYLL-B[c]
- With common name(s):
- 1 chlorophyllide b[c] + 1 phytyl diphosphate[c] + 2 H+[c] => 1 diphosphate[c] + 1 chlorophyll b[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_19542
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-creinhardtii
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-creinhardtii
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- LIGAND-RXN:
