Difference between revisions of "Tiso gene 5025"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16402 RXN-16402] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** long...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYLBUT-CPD METHYLBUT-CPD] == * smiles: ** CCC(C)[CH]=O * common name: ** 2-methylbutanal * i...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16402 RXN-16402] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYLBUT-CPD METHYLBUT-CPD] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCC(C)[CH]=O
 
* common name:
 
* common name:
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** polyketide_synthase
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** 2-methylbutanal
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** long_chain_acyl-_synthetase
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* inchi key:
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** ORF
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** InChIKey=BYGQBDHUGHBGMD-UHFFFAOYSA-N
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** acyl-_synthetase
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* molecular weight:
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* ec number:
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** 86.133   
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
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** 2-methylbutyraldehyde
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-7694]]
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[18-HYDROXYOLEATE]][c] '''=>''' 1 [[CPD-17370]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 18-hydroxyoleate[c] '''=>''' 1 18-hydroxyoleoyl-CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_348]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4191]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
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** '''8''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 96-17-3
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{{#set: common name=polyketide_synthase}}
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* PUBCHEM:
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{{#set: common name=long_chain_acyl-_synthetase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7284 7284]
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{{#set: common name=ORF}}
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* HMDB : HMDB31526
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{{#set: common name=acyl-_synthetase}}
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* LIGAND-CPD:
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{{#set: ec number=EC-6.2.1.3}}
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** [http://www.genome.jp/dbget-bin/www_bget?C02223 C02223]
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{{#set: gene associated=Tiso_gene_10876|Tiso_gene_7855|Tiso_gene_136|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_348|Tiso_gene_9394|Tiso_gene_4191}}
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* CHEMSPIDER:
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{{#set: in pathway=PWY-6733}}
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** [http://www.chemspider.com/Chemical-Structure.7012.html 7012]
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{{#set: reconstruction category=annotation}}
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* CHEBI:
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16182 16182]
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: smiles=CCC(C)[CH]=O}}
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{{#set: common name=2-methylbutanal}}
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{{#set: inchi key=InChIKey=BYGQBDHUGHBGMD-UHFFFAOYSA-N}}
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{{#set: molecular weight=86.133    }}
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{{#set: common name=2-methylbutyraldehyde}}
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{{#set: consumed by=RXN-7694}}

Revision as of 16:08, 21 March 2018

Metabolite METHYLBUT-CPD

  • smiles:
    • CCC(C)[CH]=O
  • common name:
    • 2-methylbutanal
  • inchi key:
    • InChIKey=BYGQBDHUGHBGMD-UHFFFAOYSA-N
  • molecular weight:
    • 86.133
  • Synonym(s):
    • 2-methylbutyraldehyde

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 96-17-3
  • PUBCHEM:
  • HMDB : HMDB31526
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
"CCC(C)[CH]=O" cannot be used as a page name in this wiki.



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